Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 CNN2P11-201ENST00000429351 262 ntBASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 AC124947.2-201ENST00000547118 1133 ntBASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 KRT8P49-201ENST00000604166 1432 ntBASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC60Q8IWA6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 AL023806.1-201ENST00000603994 1649 ntBASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 AC002056.1-201ENST00000395613 760 ntBASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 MPDU1-223ENST00000582151 728 ntBASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 AL513210.1-201ENST00000629608 234 ntBASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 LETM1P2-201ENST00000597330 2178 ntBASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 AC092068.3-201ENST00000587894 2016 ntBASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC60Q8IWA6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 HTR7P1-202ENST00000624664 4411 ntBASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 AL355306.1-201ENST00000415580 579 ntBASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 HCG4-201ENST00000418983 998 ntBASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 AC027612.4-201ENST00000605371 583 ntBASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 AC105339.1-204ENST00000636249 355 ntBASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 AC131009.4-201ENST00000624048 1740 ntBASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 BCL2-203ENST00000589955 5011 ntBASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC60Q8IWA6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC60Q8IWA6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC60Q8IWA6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC60Q8IWA6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC60Q8IWA6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC60Q8IWA6 AL021920.2-201ENST00000624828 1351 ntBASIC18.84■□□□□ 0.61
CCDC60Q8IWA6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms