Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rfwd3Q8CIK8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfwd3Q8CIK8 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.27□□□□□ -0.28
Rfwd3Q8CIK8 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfwd3Q8CIK8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.27□□□□□ -0.28
Rfwd3Q8CIK8 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.27□□□□□ -0.28
Rfwd3Q8CIK8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfwd3Q8CIK8 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Rfwd3Q8CIK8 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.27□□□□□ -0.28
Rfwd3Q8CIK8 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.27□□□□□ -0.28
Rfwd3Q8CIK8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfwd3Q8CIK8 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfwd3Q8CIK8 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfwd3Q8CIK8 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.28
Rfwd3Q8CIK8 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfwd3Q8CIK8 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfwd3Q8CIK8 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfwd3Q8CIK8 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.27□□□□□ -0.28
Rfwd3Q8CIK8 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfwd3Q8CIK8 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Rfwd3Q8CIK8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfwd3Q8CIK8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfwd3Q8CIK8 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Rfwd3Q8CIK8 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfwd3Q8CIK8 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfwd3Q8CIK8 Gm12882-201ENSMUST00000121696 517 ntBASIC13.27□□□□□ -0.29
Rfwd3Q8CIK8 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.27□□□□□ -0.29
Rfwd3Q8CIK8 Gm27631-201ENSMUST00000184163 466 ntBASIC13.27□□□□□ -0.29
Rfwd3Q8CIK8 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.27□□□□□ -0.29
Rfwd3Q8CIK8 Gm44872-201ENSMUST00000207864 420 ntBASIC13.27□□□□□ -0.29
Rfwd3Q8CIK8 Gm45453-201ENSMUST00000211758 853 ntBASIC13.27□□□□□ -0.29
Rfwd3Q8CIK8 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rfwd3Q8CIK8 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfwd3Q8CIK8 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfwd3Q8CIK8 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfwd3Q8CIK8 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfwd3Q8CIK8 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfwd3Q8CIK8 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfwd3Q8CIK8 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfwd3Q8CIK8 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfwd3Q8CIK8 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfwd3Q8CIK8 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rfwd3Q8CIK8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Rfwd3Q8CIK8 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Gm8410-201ENSMUST00000117225 605 ntBASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Mir6956-201ENSMUST00000183598 62 ntBASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 AA619741-201ENSMUST00000195095 646 ntBASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Rfwd3Q8CIK8 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 BC001981-202ENSMUST00000191393 1545 ntBASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms