Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.84■□□□□ 0.13
Syne4Q8CII8 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Syne4Q8CII8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Syne4Q8CII8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Syne4Q8CII8 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Syne4Q8CII8 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Syne4Q8CII8 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.13
Syne4Q8CII8 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Syne4Q8CII8 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Syne4Q8CII8 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Syne4Q8CII8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Syne4Q8CII8 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Syne4Q8CII8 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Syne4Q8CII8 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.83■□□□□ 0.12
Syne4Q8CII8 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Syne4Q8CII8 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Syne4Q8CII8 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.83■□□□□ 0.12
Syne4Q8CII8 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Syne4Q8CII8 Gm6152-201ENSMUST00000151704 340 ntBASIC15.83■□□□□ 0.12
Syne4Q8CII8 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.83■□□□□ 0.12
Syne4Q8CII8 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Syne4Q8CII8 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Syne4Q8CII8 Gm29705-201ENSMUST00000212598 474 ntBASIC15.83■□□□□ 0.12
Syne4Q8CII8 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Syne4Q8CII8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Syne4Q8CII8 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Syne4Q8CII8 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Syne4Q8CII8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Syne4Q8CII8 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Syne4Q8CII8 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Syne4Q8CII8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Syne4Q8CII8 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Syne4Q8CII8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.83■□□□□ 0.12
Syne4Q8CII8 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.83■□□□□ 0.12
Syne4Q8CII8 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Syne4Q8CII8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.82■□□□□ 0.12
Syne4Q8CII8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syne4Q8CII8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.82■□□□□ 0.12
Syne4Q8CII8 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syne4Q8CII8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Syne4Q8CII8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syne4Q8CII8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syne4Q8CII8 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syne4Q8CII8 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Syne4Q8CII8 Proscos-202ENSMUST00000178990 666 ntBASIC15.82■□□□□ 0.12
Syne4Q8CII8 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.82■□□□□ 0.12
Syne4Q8CII8 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.82■□□□□ 0.12
Syne4Q8CII8 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Syne4Q8CII8 Gm19309-201ENSMUST00000218295 205 ntBASIC15.82■□□□□ 0.12
Syne4Q8CII8 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syne4Q8CII8 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syne4Q8CII8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Syne4Q8CII8 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syne4Q8CII8 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.82■□□□□ 0.12
Syne4Q8CII8 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syne4Q8CII8 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syne4Q8CII8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Gm27243-201ENSMUST00000183964 521 ntBASIC15.81■□□□□ 0.12
Syne4Q8CII8 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Syne4Q8CII8 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Gm5161-201ENSMUST00000075243 853 ntBASIC15.81■□□□□ 0.12
Syne4Q8CII8 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne4Q8CII8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Syne4Q8CII8 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne4Q8CII8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Syne4Q8CII8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Syne4Q8CII8 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne4Q8CII8 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.8■□□□□ 0.12
Syne4Q8CII8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Syne4Q8CII8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Syne4Q8CII8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne4Q8CII8 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms