Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cps1Q8C196 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Cps1Q8C196 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cps1Q8C196 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC18.59■□□□□ 0.57
Cps1Q8C196 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cps1Q8C196 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC18.59■□□□□ 0.57
Cps1Q8C196 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cps1Q8C196 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Cps1Q8C196 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC18.59■□□□□ 0.57
Cps1Q8C196 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC18.59■□□□□ 0.57
Cps1Q8C196 Gm21769-201ENSMUST00000211922 111 ntBASIC18.59■□□□□ 0.57
Cps1Q8C196 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC18.59■□□□□ 0.57
Cps1Q8C196 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cps1Q8C196 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cps1Q8C196 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC18.58■□□□□ 0.57
Cps1Q8C196 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Cps1Q8C196 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cps1Q8C196 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cps1Q8C196 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cps1Q8C196 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cps1Q8C196 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cps1Q8C196 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cps1Q8C196 Gm11637-201ENSMUST00000120601 592 ntBASIC18.58■□□□□ 0.56
Cps1Q8C196 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cps1Q8C196 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cps1Q8C196 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cps1Q8C196 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC18.58■□□□□ 0.56
Cps1Q8C196 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC18.58■□□□□ 0.56
Cps1Q8C196 AC022775.2-201ENSMUST00000227885 646 ntBASIC18.58■□□□□ 0.56
Cps1Q8C196 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Cps1Q8C196 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cps1Q8C196 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cps1Q8C196 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cps1Q8C196 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cps1Q8C196 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cps1Q8C196 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Cps1Q8C196 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cps1Q8C196 Gm44207-201ENSMUST00000204568 1424 ntBASIC18.57■□□□□ 0.56
Cps1Q8C196 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cps1Q8C196 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cps1Q8C196 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cps1Q8C196 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Cps1Q8C196 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cps1Q8C196 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cps1Q8C196 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC18.57■□□□□ 0.56
Cps1Q8C196 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cps1Q8C196 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cps1Q8C196 Gm43509-201ENSMUST00000196551 2594 ntBASIC18.57■□□□□ 0.56
Cps1Q8C196 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC18.57■□□□□ 0.56
Cps1Q8C196 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cps1Q8C196 Gm12749-201ENSMUST00000122138 1159 ntBASIC18.57■□□□□ 0.56
Cps1Q8C196 Gm12363-201ENSMUST00000122250 668 ntBASIC18.57■□□□□ 0.56
Cps1Q8C196 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cps1Q8C196 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC18.57■□□□□ 0.56
Cps1Q8C196 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC18.57■□□□□ 0.56
Cps1Q8C196 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cps1Q8C196 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cps1Q8C196 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cps1Q8C196 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cps1Q8C196 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cps1Q8C196 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC18.57■□□□□ 0.56
Cps1Q8C196 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cps1Q8C196 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cps1Q8C196 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cps1Q8C196 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cps1Q8C196 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cps1Q8C196 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cps1Q8C196 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cps1Q8C196 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cps1Q8C196 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cps1Q8C196 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cps1Q8C196 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cps1Q8C196 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cps1Q8C196 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cps1Q8C196 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
Cps1Q8C196 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cps1Q8C196 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cps1Q8C196 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cps1Q8C196 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Cps1Q8C196 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cps1Q8C196 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cps1Q8C196 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cps1Q8C196 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cps1Q8C196 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cps1Q8C196 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cps1Q8C196 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cps1Q8C196 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cps1Q8C196 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cps1Q8C196 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cps1Q8C196 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cps1Q8C196 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cps1Q8C196 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cps1Q8C196 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cps1Q8C196 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Cps1Q8C196 Gm4986-201ENSMUST00000119731 549 ntBASIC18.55■□□□□ 0.56
Cps1Q8C196 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cps1Q8C196 Gm5896-201ENSMUST00000189662 1024 ntBASIC18.55■□□□□ 0.56
Cps1Q8C196 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cps1Q8C196 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cps1Q8C196 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms