Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Gm7046-201ENSMUST00000221351 977 ntBASIC10.96□□□□□ -0.66
Chd9Q8BYH8 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd9Q8BYH8 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd9Q8BYH8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Chd9Q8BYH8 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.96□□□□□ -0.66
Chd9Q8BYH8 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd9Q8BYH8 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd9Q8BYH8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC10.96□□□□□ -0.66
Chd9Q8BYH8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd9Q8BYH8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd9Q8BYH8 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd9Q8BYH8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd9Q8BYH8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd9Q8BYH8 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Chd9Q8BYH8 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.96□□□□□ -0.66
Chd9Q8BYH8 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC10.96□□□□□ -0.66
Chd9Q8BYH8 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd9Q8BYH8 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Gm15376-201ENSMUST00000122258 783 ntBASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.95□□□□□ -0.66
Chd9Q8BYH8 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Gm11524-201ENSMUST00000119349 807 ntBASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Gm7902-201ENSMUST00000198842 947 ntBASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Gm8242-201ENSMUST00000193029 1420 ntBASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Gm43094-201ENSMUST00000196549 921 ntBASIC10.95□□□□□ -0.66
Chd9Q8BYH8 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.95□□□□□ -0.66
Chd9Q8BYH8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Gm3283-201ENSMUST00000199319 1350 ntBASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd9Q8BYH8 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd9Q8BYH8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chd9Q8BYH8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd9Q8BYH8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd9Q8BYH8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Chd9Q8BYH8 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chd9Q8BYH8 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chd9Q8BYH8 Gm27682-201ENSMUST00000183930 110 ntBASIC10.93□□□□□ -0.66
Chd9Q8BYH8 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms