Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Gm14494-201ENSMUST00000118786 435 ntBASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Gm15467-201ENSMUST00000120582 445 ntBASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Gm10275-202ENSMUST00000168697 495 ntBASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Gm8584-201ENSMUST00000171982 758 ntBASIC13.61□□□□□ -0.23
Cpne3Q8BT60 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Gm20553-201ENSMUST00000204205 844 ntBASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Gm10275-201ENSMUST00000092620 635 ntBASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.61□□□□□ -0.23
Cpne3Q8BT60 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Gm11779-201ENSMUST00000118541 368 ntBASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpne3Q8BT60 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Gm44771-201ENSMUST00000206975 626 ntBASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms