Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC18.14■□□□□ 0.49
Col16a1Q8BLX7 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC18.14■□□□□ 0.49
Col16a1Q8BLX7 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col16a1Q8BLX7 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC18.14■□□□□ 0.49
Col16a1Q8BLX7 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Col16a1Q8BLX7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col16a1Q8BLX7 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col16a1Q8BLX7 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col16a1Q8BLX7 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col16a1Q8BLX7 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col16a1Q8BLX7 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col16a1Q8BLX7 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col16a1Q8BLX7 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col16a1Q8BLX7 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col16a1Q8BLX7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 Gm38000-201ENSMUST00000192390 1215 ntBASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 CT573086.1-201ENSMUST00000227202 1074 ntBASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 Gm10146-201ENSMUST00000072739 309 ntBASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 n-R5s195-201ENSMUST00000082891 119 ntBASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 Gm6621-201ENSMUST00000193251 772 ntBASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col16a1Q8BLX7 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col16a1Q8BLX7 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Col16a1Q8BLX7 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col16a1Q8BLX7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col16a1Q8BLX7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col16a1Q8BLX7 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col16a1Q8BLX7 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col16a1Q8BLX7 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col16a1Q8BLX7 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Col16a1Q8BLX7 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Col16a1Q8BLX7 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Col16a1Q8BLX7 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC18.12■□□□□ 0.49
Col16a1Q8BLX7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Col16a1Q8BLX7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC18.12■□□□□ 0.49
Col16a1Q8BLX7 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC18.12■□□□□ 0.49
Col16a1Q8BLX7 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col16a1Q8BLX7 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col16a1Q8BLX7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col16a1Q8BLX7 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col16a1Q8BLX7 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Gm24255-201ENSMUST00000104481 128 ntBASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Mettl6-204ENSMUST00000227595 1027 ntBASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Col16a1Q8BLX7 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col16a1Q8BLX7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col16a1Q8BLX7 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.1■□□□□ 0.49
Col16a1Q8BLX7 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC18.1■□□□□ 0.49
Col16a1Q8BLX7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col16a1Q8BLX7 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col16a1Q8BLX7 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col16a1Q8BLX7 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col16a1Q8BLX7 Gm7118-201ENSMUST00000200167 1003 ntBASIC18.1■□□□□ 0.49
Col16a1Q8BLX7 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
Col16a1Q8BLX7 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col16a1Q8BLX7 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms