Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.61□□□□□ -0.23
Trim36Q80WG7 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.61□□□□□ -0.23
Trim36Q80WG7 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim36Q80WG7 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim36Q80WG7 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim36Q80WG7 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim36Q80WG7 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim36Q80WG7 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim36Q80WG7 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim36Q80WG7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim36Q80WG7 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trim36Q80WG7 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim36Q80WG7 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trim36Q80WG7 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim36Q80WG7 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim36Q80WG7 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.6□□□□□ -0.23
Trim36Q80WG7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.6□□□□□ -0.23
Trim36Q80WG7 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.6□□□□□ -0.23
Trim36Q80WG7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.6□□□□□ -0.23
Trim36Q80WG7 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.6□□□□□ -0.23
Trim36Q80WG7 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim36Q80WG7 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Gm13464-201ENSMUST00000119418 935 ntBASIC13.59□□□□□ -0.23
Trim36Q80WG7 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Gm13616-201ENSMUST00000120600 222 ntBASIC13.59□□□□□ -0.23
Trim36Q80WG7 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Gm18889-201ENSMUST00000174284 929 ntBASIC13.59□□□□□ -0.23
Trim36Q80WG7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Mir6990-201ENSMUST00000183724 91 ntBASIC13.59□□□□□ -0.23
Trim36Q80WG7 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Gm5312-201ENSMUST00000203728 547 ntBASIC13.59□□□□□ -0.23
Trim36Q80WG7 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.59□□□□□ -0.23
Trim36Q80WG7 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.59□□□□□ -0.23
Trim36Q80WG7 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim36Q80WG7 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim36Q80WG7 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim36Q80WG7 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim36Q80WG7 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms