Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.23■□□□□ 0.19
Prpf40bQ80W14 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.22■□□□□ 0.19
Prpf40bQ80W14 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Mir1247-201ENSMUST00000116706 82 ntBASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Gm45453-201ENSMUST00000211758 853 ntBASIC16.22■□□□□ 0.19
Prpf40bQ80W14 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40bQ80W14 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Gm15678-201ENSMUST00000117573 960 ntBASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Gm13392-201ENSMUST00000117708 150 ntBASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms