Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Csmd3Q80T79 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Csmd3Q80T79 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Csmd3Q80T79 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Csmd3Q80T79 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Csmd3Q80T79 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Csmd3Q80T79 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Csmd3Q80T79 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Csmd3Q80T79 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Csmd3Q80T79 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Csmd3Q80T79 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Csmd3Q80T79 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Csmd3Q80T79 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC9.41□□□□□ -0.9
Csmd3Q80T79 Gm30437-201ENSMUST00000206086 1201 ntBASIC9.41□□□□□ -0.9
Csmd3Q80T79 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
Csmd3Q80T79 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Csmd3Q80T79 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Csmd3Q80T79 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Csmd3Q80T79 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Csmd3Q80T79 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Csmd3Q80T79 Gm37411-201ENSMUST00000194180 2282 ntBASIC9.41□□□□□ -0.9
Csmd3Q80T79 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Csmd3Q80T79 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Csmd3Q80T79 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Gm9856-201ENSMUST00000217077 2578 ntBASIC9.4□□□□□ -0.9
Csmd3Q80T79 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Gm24548-201ENSMUST00000158650 108 ntBASIC9.4□□□□□ -0.9
Csmd3Q80T79 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Mir6927-201ENSMUST00000184494 71 ntBASIC9.4□□□□□ -0.9
Csmd3Q80T79 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC9.4□□□□□ -0.9
Csmd3Q80T79 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Mir433-201ENSMUST00000093564 124 ntBASIC9.4□□□□□ -0.9
Csmd3Q80T79 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC9.4□□□□□ -0.9
Csmd3Q80T79 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Gm8805-201ENSMUST00000117848 313 ntBASIC9.4□□□□□ -0.9
Csmd3Q80T79 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC9.4□□□□□ -0.9
Csmd3Q80T79 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Gm14608-201ENSMUST00000120030 1553 ntBASIC9.4□□□□□ -0.9
Csmd3Q80T79 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Csmd3Q80T79 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Csmd3Q80T79 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC9.4□□□□□ -0.91
Csmd3Q80T79 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC9.4□□□□□ -0.91
Csmd3Q80T79 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Csmd3Q80T79 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Csmd3Q80T79 Gm11222-201ENSMUST00000119005 738 ntBASIC9.4□□□□□ -0.91
Csmd3Q80T79 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Csmd3Q80T79 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC9.4□□□□□ -0.91
Csmd3Q80T79 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Csmd3Q80T79 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
Csmd3Q80T79 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Csmd3Q80T79 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
Csmd3Q80T79 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Csmd3Q80T79 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Csmd3Q80T79 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Csmd3Q80T79 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Csmd3Q80T79 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Csmd3Q80T79 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Csmd3Q80T79 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Csmd3Q80T79 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Csmd3Q80T79 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Csmd3Q80T79 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Csmd3Q80T79 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC9.39□□□□□ -0.91
Csmd3Q80T79 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC9.39□□□□□ -0.91
Csmd3Q80T79 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Csmd3Q80T79 Gm11964-201ENSMUST00000120982 444 ntBASIC9.39□□□□□ -0.91
Csmd3Q80T79 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC9.39□□□□□ -0.91
Csmd3Q80T79 Gm16479-201ENSMUST00000121706 932 ntBASIC9.39□□□□□ -0.91
Csmd3Q80T79 Gm12134-201ENSMUST00000122109 520 ntBASIC9.39□□□□□ -0.91
Csmd3Q80T79 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC9.39□□□□□ -0.91
Csmd3Q80T79 D9Wsu149-201ENSMUST00000214169 594 ntBASIC9.39□□□□□ -0.91
Csmd3Q80T79 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC9.39□□□□□ -0.91
Csmd3Q80T79 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Csmd3Q80T79 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Csmd3Q80T79 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC9.39□□□□□ -0.91
Csmd3Q80T79 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Csmd3Q80T79 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Csmd3Q80T79 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms