Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Zscan30-202ENSMUST00000224144 1458 ntBASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Gm11618-201ENSMUST00000117946 267 ntBASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Gm9299-201ENSMUST00000206392 1140 ntBASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Gm40466-201ENSMUST00000212174 422 ntBASIC16.31■□□□□ 0.2
Nup98Q6PFD9 AC140451.2-201ENSMUST00000228030 664 ntBASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Gm5620-201ENSMUST00000077991 1348 ntBASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Mir686-201ENSMUST00000102174 109 ntBASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Gm42693-201ENSMUST00000196779 631 ntBASIC16.31■□□□□ 0.2
Nup98Q6PFD9 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup98Q6PFD9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Gm19184-201ENSMUST00000196798 928 ntBASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Gm15544-201ENSMUST00000118776 1531 ntBASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup98Q6PFD9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Gm45331-201ENSMUST00000209868 554 ntBASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Gm8706-201ENSMUST00000197372 1491 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms