Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col12a1Q60847 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col12a1Q60847 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col12a1Q60847 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Col12a1Q60847 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col12a1Q60847 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.6□□□□□ -0.23
Col12a1Q60847 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.6□□□□□ -0.23
Col12a1Q60847 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col12a1Q60847 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col12a1Q60847 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col12a1Q60847 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col12a1Q60847 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Col12a1Q60847 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col12a1Q60847 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col12a1Q60847 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col12a1Q60847 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Col12a1Q60847 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Col12a1Q60847 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col12a1Q60847 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col12a1Q60847 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.6□□□□□ -0.23
Col12a1Q60847 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.6□□□□□ -0.23
Col12a1Q60847 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.6□□□□□ -0.23
Col12a1Q60847 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col12a1Q60847 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col12a1Q60847 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col12a1Q60847 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col12a1Q60847 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col12a1Q60847 Gm7809-201ENSMUST00000153199 742 ntBASIC13.59□□□□□ -0.23
Col12a1Q60847 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col12a1Q60847 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Col12a1Q60847 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col12a1Q60847 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col12a1Q60847 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col12a1Q60847 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col12a1Q60847 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col12a1Q60847 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.59□□□□□ -0.23
Col12a1Q60847 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col12a1Q60847 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.59□□□□□ -0.23
Col12a1Q60847 Gm24447-201ENSMUST00000083977 338 ntBASIC13.59□□□□□ -0.23
Col12a1Q60847 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col12a1Q60847 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col12a1Q60847 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col12a1Q60847 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col12a1Q60847 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col12a1Q60847 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col12a1Q60847 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col12a1Q60847 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col12a1Q60847 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col12a1Q60847 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
Col12a1Q60847 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col12a1Q60847 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col12a1Q60847 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.59□□□□□ -0.23
Col12a1Q60847 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col12a1Q60847 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col12a1Q60847 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col12a1Q60847 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col12a1Q60847 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col12a1Q60847 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Col12a1Q60847 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col12a1Q60847 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Col12a1Q60847 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col12a1Q60847 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.58□□□□□ -0.24
Col12a1Q60847 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Col12a1Q60847 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col12a1Q60847 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.58□□□□□ -0.24
Col12a1Q60847 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.58□□□□□ -0.24
Col12a1Q60847 Gm26315-201ENSMUST00000083890 321 ntBASIC13.58□□□□□ -0.24
Col12a1Q60847 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col12a1Q60847 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col12a1Q60847 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col12a1Q60847 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Col12a1Q60847 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col12a1Q60847 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col12a1Q60847 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Col12a1Q60847 Gm11331-201ENSMUST00000119764 288 ntBASIC13.58□□□□□ -0.24
Col12a1Q60847 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Col12a1Q60847 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.58□□□□□ -0.24
Col12a1Q60847 Gm23699-201ENSMUST00000158835 135 ntBASIC13.58□□□□□ -0.24
Col12a1Q60847 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.58□□□□□ -0.24
Col12a1Q60847 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.58□□□□□ -0.24
Col12a1Q60847 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col12a1Q60847 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col12a1Q60847 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.58□□□□□ -0.24
Col12a1Q60847 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.58□□□□□ -0.24
Col12a1Q60847 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.58□□□□□ -0.24
Col12a1Q60847 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.58□□□□□ -0.24
Col12a1Q60847 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col12a1Q60847 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.57□□□□□ -0.24
Col12a1Q60847 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col12a1Q60847 Gm12616-201ENSMUST00000118594 382 ntBASIC13.57□□□□□ -0.24
Col12a1Q60847 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col12a1Q60847 Gm12624-201ENSMUST00000177615 382 ntBASIC13.57□□□□□ -0.24
Col12a1Q60847 Gm12621-201ENSMUST00000177760 382 ntBASIC13.57□□□□□ -0.24
Col12a1Q60847 Gm12615-201ENSMUST00000177970 382 ntBASIC13.57□□□□□ -0.24
Col12a1Q60847 Gm12622-201ENSMUST00000177975 382 ntBASIC13.57□□□□□ -0.24
Col12a1Q60847 Gm12627-201ENSMUST00000178412 382 ntBASIC13.57□□□□□ -0.24
Col12a1Q60847 Gm12625-201ENSMUST00000179122 382 ntBASIC13.57□□□□□ -0.24
Col12a1Q60847 Gm12614-201ENSMUST00000179586 382 ntBASIC13.57□□□□□ -0.24
Col12a1Q60847 Gm12613-201ENSMUST00000180323 382 ntBASIC13.57□□□□□ -0.24
Col12a1Q60847 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms