Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Gm13385-201ENSMUST00000121089 220 ntBASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Gm19220-201ENSMUST00000222682 803 ntBASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rc3h1Q4VGL6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rc3h1Q4VGL6 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Gm12134-201ENSMUST00000122109 520 ntBASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rc3h1Q4VGL6 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Rc3h1Q4VGL6 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rc3h1Q4VGL6 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.21■□□□□ 0.19
Rc3h1Q4VGL6 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms