Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Spg11Q3UHA3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Spg11Q3UHA3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Spg11Q3UHA3 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Spg11Q3UHA3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.83□□□□□ -0.35
Spg11Q3UHA3 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.83□□□□□ -0.35
Spg11Q3UHA3 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Spg11Q3UHA3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Spg11Q3UHA3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Spg11Q3UHA3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Spg11Q3UHA3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Spg11Q3UHA3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Spg11Q3UHA3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Spg11Q3UHA3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Spg11Q3UHA3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.83□□□□□ -0.36
Spg11Q3UHA3 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Spg11Q3UHA3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Spg11Q3UHA3 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Spg11Q3UHA3 Sybu-209ENSMUST00000228639 4113 ntBASIC12.83□□□□□ -0.36
Spg11Q3UHA3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Spg11Q3UHA3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Spg11Q3UHA3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Spg11Q3UHA3 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Spg11Q3UHA3 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.83□□□□□ -0.36
Spg11Q3UHA3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Spg11Q3UHA3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.83□□□□□ -0.36
Spg11Q3UHA3 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.83□□□□□ -0.36
Spg11Q3UHA3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Spg11Q3UHA3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Spg11Q3UHA3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Spg11Q3UHA3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Spg11Q3UHA3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Spg11Q3UHA3 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.83□□□□□ -0.36
Spg11Q3UHA3 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Gm23699-201ENSMUST00000158835 135 ntBASIC12.82□□□□□ -0.36
Spg11Q3UHA3 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Gm13665-201ENSMUST00000120830 528 ntBASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Spg11Q3UHA3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Gm13408-201ENSMUST00000119822 798 ntBASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Gm13935-201ENSMUST00000121859 798 ntBASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Gm25517-201ENSMUST00000083865 134 ntBASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms