Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Gm16379-201ENSMUST00000161469 348 ntBASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Gm8762-201ENSMUST00000193486 339 ntBASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Gm42997-202ENSMUST00000200321 985 ntBASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Gm43947-201ENSMUST00000203019 959 ntBASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Gm45186-201ENSMUST00000206874 478 ntBASIC14.86□□□□□ -0.03
Col19a1Q0VF58 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col19a1Q0VF58 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col19a1Q0VF58 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col19a1Q0VF58 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col19a1Q0VF58 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col19a1Q0VF58 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col19a1Q0VF58 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col19a1Q0VF58 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col19a1Q0VF58 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col19a1Q0VF58 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col19a1Q0VF58 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms