Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.08□□□□□ -0.48
Smn1P97801 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Smn1P97801 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.08□□□□□ -0.48
Smn1P97801 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Smn1P97801 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
Smn1P97801 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Smn1P97801 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Smn1P97801 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Smn1P97801 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.07□□□□□ -0.48
Smn1P97801 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Smn1P97801 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 Gm5479-201ENSMUST00000160578 435 ntBASIC12.07□□□□□ -0.48
Smn1P97801 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.07□□□□□ -0.48
Smn1P97801 Gm27628-201ENSMUST00000184911 107 ntBASIC12.07□□□□□ -0.48
Smn1P97801 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Smn1P97801 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.07□□□□□ -0.48
Smn1P97801 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Smn1P97801 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smn1P97801 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Smn1P97801 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.06□□□□□ -0.48
Smn1P97801 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.06□□□□□ -0.48
Smn1P97801 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Smn1P97801 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Smn1P97801 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.06□□□□□ -0.48
Smn1P97801 Gm21362-201ENSMUST00000194272 928 ntBASIC12.06□□□□□ -0.48
Smn1P97801 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.06□□□□□ -0.48
Smn1P97801 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.06□□□□□ -0.48
Smn1P97801 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.06□□□□□ -0.48
Smn1P97801 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Smn1P97801 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Smn1P97801 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Smn1P97801 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Smn1P97801 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Smn1P97801 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smn1P97801 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Smn1P97801 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms