Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43bP86448 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43bP86448 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Trim43bP86448 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.49□□□□□ -0.09
Trim43bP86448 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43bP86448 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43bP86448 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43bP86448 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43bP86448 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trim43bP86448 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43bP86448 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43bP86448 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Trim43bP86448 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.49□□□□□ -0.09
Trim43bP86448 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.49□□□□□ -0.09
Trim43bP86448 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Trim43bP86448 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.49□□□□□ -0.09
Trim43bP86448 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim43bP86448 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43bP86448 Mir6990-201ENSMUST00000183724 91 ntBASIC14.49□□□□□ -0.09
Trim43bP86448 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.49□□□□□ -0.09
Trim43bP86448 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43bP86448 Gm44872-201ENSMUST00000207864 420 ntBASIC14.49□□□□□ -0.09
Trim43bP86448 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43bP86448 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.49□□□□□ -0.09
Trim43bP86448 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.49□□□□□ -0.09
Trim43bP86448 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Trim43bP86448 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43bP86448 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43bP86448 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43bP86448 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43bP86448 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trim43bP86448 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43bP86448 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43bP86448 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43bP86448 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim43bP86448 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43bP86448 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trim43bP86448 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43bP86448 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43bP86448 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43bP86448 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43bP86448 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Trim43bP86448 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43bP86448 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43bP86448 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43bP86448 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43bP86448 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.48□□□□□ -0.09
Trim43bP86448 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43bP86448 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43bP86448 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43bP86448 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43bP86448 Gm13365-201ENSMUST00000121188 973 ntBASIC14.48□□□□□ -0.09
Trim43bP86448 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.48□□□□□ -0.09
Trim43bP86448 Gm18889-201ENSMUST00000174284 929 ntBASIC14.48□□□□□ -0.09
Trim43bP86448 Gm20553-201ENSMUST00000204205 844 ntBASIC14.48□□□□□ -0.09
Trim43bP86448 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.48□□□□□ -0.09
Trim43bP86448 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trim43bP86448 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43bP86448 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43bP86448 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43bP86448 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43bP86448 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43bP86448 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim43bP86448 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43bP86448 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43bP86448 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim43bP86448 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43bP86448 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
Trim43bP86448 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43bP86448 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43bP86448 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.47□□□□□ -0.09
Trim43bP86448 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43bP86448 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43bP86448 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43bP86448 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43bP86448 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43bP86448 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43bP86448 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43bP86448 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
Trim43bP86448 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43bP86448 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trim43bP86448 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43bP86448 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43bP86448 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43bP86448 Gm9385-201ENSMUST00000117563 472 ntBASIC14.47□□□□□ -0.09
Trim43bP86448 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.47□□□□□ -0.09
Trim43bP86448 Gm11543-201ENSMUST00000120758 370 ntBASIC14.47□□□□□ -0.09
Trim43bP86448 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43bP86448 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim43bP86448 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trim43bP86448 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim43bP86448 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.47□□□□□ -0.09
Trim43bP86448 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43bP86448 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43bP86448 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43bP86448 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trim43bP86448 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43bP86448 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43bP86448 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43bP86448 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms