Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shox2P70390 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shox2P70390 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shox2P70390 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shox2P70390 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shox2P70390 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shox2P70390 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shox2P70390 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.92□□□□□ -0.18
Shox2P70390 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Shox2P70390 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.92□□□□□ -0.18
Shox2P70390 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shox2P70390 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Shox2P70390 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Shox2P70390 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shox2P70390 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Shox2P70390 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Shox2P70390 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shox2P70390 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.91□□□□□ -0.18
Shox2P70390 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shox2P70390 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.91□□□□□ -0.18
Shox2P70390 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shox2P70390 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shox2P70390 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.91□□□□□ -0.18
Shox2P70390 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Shox2P70390 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shox2P70390 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Shox2P70390 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.91□□□□□ -0.18
Shox2P70390 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shox2P70390 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.91□□□□□ -0.18
Shox2P70390 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shox2P70390 Gm25016-201ENSMUST00000158399 131 ntBASIC13.91□□□□□ -0.18
Shox2P70390 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.91□□□□□ -0.18
Shox2P70390 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.91□□□□□ -0.18
Shox2P70390 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.91□□□□□ -0.18
Shox2P70390 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shox2P70390 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.91□□□□□ -0.18
Shox2P70390 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.91□□□□□ -0.18
Shox2P70390 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shox2P70390 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Shox2P70390 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shox2P70390 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shox2P70390 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Shox2P70390 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Shox2P70390 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shox2P70390 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shox2P70390 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shox2P70390 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shox2P70390 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.91□□□□□ -0.18
Shox2P70390 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shox2P70390 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shox2P70390 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Shox2P70390 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shox2P70390 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shox2P70390 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shox2P70390 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shox2P70390 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.9□□□□□ -0.18
Shox2P70390 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Shox2P70390 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Shox2P70390 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.9□□□□□ -0.18
Shox2P70390 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Shox2P70390 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shox2P70390 Gm45098-201ENSMUST00000207179 657 ntBASIC13.9□□□□□ -0.18
Shox2P70390 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.9□□□□□ -0.18
Shox2P70390 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Shox2P70390 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
Shox2P70390 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shox2P70390 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shox2P70390 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Shox2P70390 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.9□□□□□ -0.18
Shox2P70390 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.9□□□□□ -0.18
Shox2P70390 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.9□□□□□ -0.18
Shox2P70390 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Shox2P70390 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shox2P70390 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shox2P70390 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shox2P70390 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shox2P70390 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shox2P70390 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Shox2P70390 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shox2P70390 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shox2P70390 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shox2P70390 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shox2P70390 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shox2P70390 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.89□□□□□ -0.19
Shox2P70390 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shox2P70390 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shox2P70390 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.89□□□□□ -0.19
Shox2P70390 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shox2P70390 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shox2P70390 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shox2P70390 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shox2P70390 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Shox2P70390 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.89□□□□□ -0.19
Shox2P70390 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Shox2P70390 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.89□□□□□ -0.19
Shox2P70390 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shox2P70390 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.89□□□□□ -0.19
Shox2P70390 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.89□□□□□ -0.19
Shox2P70390 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.89□□□□□ -0.19
Shox2P70390 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms