Protein–RNA interactions for Protein: P70279

Surf6, Surfeit locus protein 6, mousemouse

Known RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf6P70279 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Surf6P70279 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Surf6P70279 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Surf6P70279 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Surf6P70279 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Surf6P70279 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Surf6P70279 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Surf6P70279 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Surf6P70279 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Surf6P70279 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Surf6P70279 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Surf6P70279 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.62□□□□□ -0.07
Surf6P70279 Gm13464-201ENSMUST00000119418 935 ntBASIC14.62□□□□□ -0.07
Surf6P70279 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Surf6P70279 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Surf6P70279 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Surf6P70279 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.62□□□□□ -0.07
Surf6P70279 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.62□□□□□ -0.07
Surf6P70279 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.62□□□□□ -0.07
Surf6P70279 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.62□□□□□ -0.07
Surf6P70279 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Surf6P70279 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Surf6P70279 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Surf6P70279 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Surf6P70279 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Surf6P70279 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Surf6P70279 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Surf6P70279 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Surf6P70279 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Surf6P70279 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Surf6P70279 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.62□□□□□ -0.07
Surf6P70279 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Surf6P70279 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Surf6P70279 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Surf6P70279 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Surf6P70279 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.61□□□□□ -0.07
Surf6P70279 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Surf6P70279 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Surf6P70279 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Surf6P70279 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Surf6P70279 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.61□□□□□ -0.07
Surf6P70279 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Surf6P70279 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.61□□□□□ -0.07
Surf6P70279 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.61□□□□□ -0.07
Surf6P70279 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.61□□□□□ -0.07
Surf6P70279 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Surf6P70279 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Surf6P70279 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Surf6P70279 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Surf6P70279 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Surf6P70279 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Surf6P70279 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Surf6P70279 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.6□□□□□ -0.07
Surf6P70279 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Surf6P70279 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.6□□□□□ -0.07
Surf6P70279 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Surf6P70279 Gm2651-201ENSMUST00000203560 838 ntBASIC14.6□□□□□ -0.07
Surf6P70279 Gm7506-201ENSMUST00000207758 815 ntBASIC14.6□□□□□ -0.07
Surf6P70279 Gm6296-201ENSMUST00000222599 943 ntBASIC14.6□□□□□ -0.07
Surf6P70279 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Surf6P70279 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Surf6P70279 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Surf6P70279 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Surf6P70279 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.6□□□□□ -0.07
Surf6P70279 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Surf6P70279 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Surf6P70279 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Surf6P70279 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Surf6P70279 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Surf6P70279 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Surf6P70279 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Surf6P70279 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Surf6P70279 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms