Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ybx1P62960 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ybx1P62960 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ybx1P62960 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ybx1P62960 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ybx1P62960 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ybx1P62960 Gm2495-201ENSMUST00000191160 466 ntBASIC14.39□□□□□ -0.11
Ybx1P62960 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.39□□□□□ -0.11
Ybx1P62960 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ybx1P62960 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ybx1P62960 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ybx1P62960 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ybx1P62960 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.39□□□□□ -0.11
Ybx1P62960 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.39□□□□□ -0.11
Ybx1P62960 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ybx1P62960 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ybx1P62960 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.39□□□□□ -0.11
Ybx1P62960 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.39□□□□□ -0.11
Ybx1P62960 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ybx1P62960 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.39□□□□□ -0.11
Ybx1P62960 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ybx1P62960 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ybx1P62960 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ybx1P62960 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ybx1P62960 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.38□□□□□ -0.11
Ybx1P62960 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ybx1P62960 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Mir6420-201ENSMUST00000185032 102 ntBASIC14.38□□□□□ -0.11
Ybx1P62960 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ybx1P62960 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.38□□□□□ -0.11
Ybx1P62960 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Ybx1P62960 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ybx1P62960 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ybx1P62960 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.38□□□□□ -0.11
Ybx1P62960 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ybx1P62960 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ybx1P62960 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ybx1P62960 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ybx1P62960 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ybx1P62960 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Ybx1P62960 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ybx1P62960 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ybx1P62960 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ybx1P62960 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ybx1P62960 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ybx1P62960 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ybx1P62960 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ybx1P62960 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ybx1P62960 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.37□□□□□ -0.11
Ybx1P62960 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.37□□□□□ -0.11
Ybx1P62960 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.37□□□□□ -0.11
Ybx1P62960 Gm43094-201ENSMUST00000196549 921 ntBASIC14.37□□□□□ -0.11
Ybx1P62960 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ybx1P62960 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.37□□□□□ -0.11
Ybx1P62960 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.37□□□□□ -0.11
Ybx1P62960 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.37□□□□□ -0.11
Ybx1P62960 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ybx1P62960 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.37□□□□□ -0.11
Ybx1P62960 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ybx1P62960 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.37□□□□□ -0.11
Ybx1P62960 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ybx1P62960 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ybx1P62960 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ybx1P62960 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ybx1P62960 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ybx1P62960 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ybx1P62960 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ybx1P62960 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ybx1P62960 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ybx1P62960 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms