Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nphp4P59240 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nphp4P59240 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nphp4P59240 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nphp4P59240 Gm8213-201ENSMUST00000118191 441 ntBASIC18.89■□□□□ 0.61
Nphp4P59240 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Nphp4P59240 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Nphp4P59240 Gm38230-201ENSMUST00000193572 1159 ntBASIC18.89■□□□□ 0.61
Nphp4P59240 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nphp4P59240 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nphp4P59240 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nphp4P59240 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nphp4P59240 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nphp4P59240 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nphp4P59240 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nphp4P59240 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nphp4P59240 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nphp4P59240 Zscan30-202ENSMUST00000224144 1458 ntBASIC18.89■□□□□ 0.61
Nphp4P59240 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nphp4P59240 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nphp4P59240 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nphp4P59240 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nphp4P59240 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nphp4P59240 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nphp4P59240 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nphp4P59240 Gm9755-201ENSMUST00000032981 1356 ntBASIC18.88■□□□□ 0.61
Nphp4P59240 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nphp4P59240 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nphp4P59240 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nphp4P59240 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC18.88■□□□□ 0.61
Nphp4P59240 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC18.88■□□□□ 0.61
Nphp4P59240 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC18.88■□□□□ 0.61
Nphp4P59240 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nphp4P59240 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nphp4P59240 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nphp4P59240 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nphp4P59240 Gm8810-201ENSMUST00000172895 754 ntBASIC18.88■□□□□ 0.61
Nphp4P59240 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nphp4P59240 Gm43630-201ENSMUST00000201550 776 ntBASIC18.88■□□□□ 0.61
Nphp4P59240 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC18.88■□□□□ 0.61
Nphp4P59240 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Nphp4P59240 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nphp4P59240 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nphp4P59240 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.88■□□□□ 0.61
Nphp4P59240 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Nphp4P59240 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nphp4P59240 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nphp4P59240 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nphp4P59240 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nphp4P59240 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Nphp4P59240 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nphp4P59240 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nphp4P59240 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nphp4P59240 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC18.87■□□□□ 0.61
Nphp4P59240 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Nphp4P59240 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nphp4P59240 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nphp4P59240 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nphp4P59240 Gm27847-201ENSMUST00000183711 107 ntBASIC18.87■□□□□ 0.61
Nphp4P59240 Gm27375-201ENSMUST00000183799 107 ntBASIC18.87■□□□□ 0.61
Nphp4P59240 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nphp4P59240 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nphp4P59240 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nphp4P59240 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nphp4P59240 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nphp4P59240 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Nphp4P59240 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nphp4P59240 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nphp4P59240 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nphp4P59240 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nphp4P59240 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nphp4P59240 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nphp4P59240 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nphp4P59240 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Nphp4P59240 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nphp4P59240 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nphp4P59240 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Nphp4P59240 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nphp4P59240 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC18.86■□□□□ 0.61
Nphp4P59240 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nphp4P59240 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC18.86■□□□□ 0.61
Nphp4P59240 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nphp4P59240 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nphp4P59240 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nphp4P59240 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
Nphp4P59240 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nphp4P59240 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nphp4P59240 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nphp4P59240 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nphp4P59240 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nphp4P59240 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nphp4P59240 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC18.85■□□□□ 0.61
Nphp4P59240 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nphp4P59240 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nphp4P59240 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nphp4P59240 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nphp4P59240 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC18.85■□□□□ 0.61
Nphp4P59240 Gm23931-201ENSMUST00000103842 109 ntBASIC18.85■□□□□ 0.61
Nphp4P59240 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC18.85■□□□□ 0.61
Nphp4P59240 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms