Protein–RNA interactions for Protein: P51642

Cntf, Ciliary neurotrophic factor, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CntfP51642 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CntfP51642 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CntfP51642 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CntfP51642 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CntfP51642 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.21□□□□□ -0.3
CntfP51642 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CntfP51642 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CntfP51642 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CntfP51642 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CntfP51642 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CntfP51642 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CntfP51642 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CntfP51642 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CntfP51642 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
CntfP51642 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.2□□□□□ -0.3
CntfP51642 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.2□□□□□ -0.3
CntfP51642 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CntfP51642 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CntfP51642 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CntfP51642 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CntfP51642 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CntfP51642 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CntfP51642 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CntfP51642 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CntfP51642 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CntfP51642 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CntfP51642 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CntfP51642 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CntfP51642 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CntfP51642 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CntfP51642 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CntfP51642 Mir3113-201ENSMUST00000175478 76 ntBASIC13.2□□□□□ -0.3
CntfP51642 Gm27920-201ENSMUST00000183953 96 ntBASIC13.2□□□□□ -0.3
CntfP51642 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CntfP51642 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.2□□□□□ -0.3
CntfP51642 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.2□□□□□ -0.3
CntfP51642 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CntfP51642 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CntfP51642 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CntfP51642 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CntfP51642 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CntfP51642 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
CntfP51642 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CntfP51642 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CntfP51642 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CntfP51642 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CntfP51642 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CntfP51642 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.2□□□□□ -0.3
CntfP51642 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CntfP51642 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CntfP51642 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CntfP51642 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CntfP51642 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CntfP51642 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CntfP51642 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CntfP51642 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CntfP51642 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CntfP51642 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CntfP51642 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CntfP51642 Gm11543-201ENSMUST00000120758 370 ntBASIC13.19□□□□□ -0.3
CntfP51642 Gm12260-201ENSMUST00000122447 411 ntBASIC13.19□□□□□ -0.3
CntfP51642 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.19□□□□□ -0.3
CntfP51642 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CntfP51642 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.19□□□□□ -0.3
CntfP51642 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.19□□□□□ -0.3
CntfP51642 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.19□□□□□ -0.3
CntfP51642 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.19□□□□□ -0.3
CntfP51642 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CntfP51642 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.19□□□□□ -0.3
CntfP51642 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CntfP51642 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CntfP51642 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CntfP51642 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CntfP51642 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.19□□□□□ -0.3
CntfP51642 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CntfP51642 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CntfP51642 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CntfP51642 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CntfP51642 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CntfP51642 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CntfP51642 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CntfP51642 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CntfP51642 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CntfP51642 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CntfP51642 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CntfP51642 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CntfP51642 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CntfP51642 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CntfP51642 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
CntfP51642 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CntfP51642 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CntfP51642 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CntfP51642 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CntfP51642 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CntfP51642 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CntfP51642 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CntfP51642 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CntfP51642 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CntfP51642 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CntfP51642 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms