Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.79■□□□□ 0.12
Sdc2P43407 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sdc2P43407 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sdc2P43407 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.79■□□□□ 0.12
Sdc2P43407 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sdc2P43407 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sdc2P43407 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.79■□□□□ 0.12
Sdc2P43407 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sdc2P43407 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.79■□□□□ 0.12
Sdc2P43407 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.79■□□□□ 0.12
Sdc2P43407 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.79■□□□□ 0.12
Sdc2P43407 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.79■□□□□ 0.12
Sdc2P43407 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.79■□□□□ 0.12
Sdc2P43407 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sdc2P43407 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sdc2P43407 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sdc2P43407 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.79■□□□□ 0.12
Sdc2P43407 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.79■□□□□ 0.12
Sdc2P43407 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Sdc2P43407 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.79■□□□□ 0.12
Sdc2P43407 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.79■□□□□ 0.12
Sdc2P43407 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sdc2P43407 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sdc2P43407 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sdc2P43407 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Sdc2P43407 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Sdc2P43407 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sdc2P43407 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sdc2P43407 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Sdc2P43407 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sdc2P43407 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sdc2P43407 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sdc2P43407 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sdc2P43407 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.78■□□□□ 0.12
Sdc2P43407 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.78■□□□□ 0.12
Sdc2P43407 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sdc2P43407 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sdc2P43407 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sdc2P43407 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sdc2P43407 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sdc2P43407 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sdc2P43407 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sdc2P43407 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sdc2P43407 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sdc2P43407 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Sdc2P43407 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sdc2P43407 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.78■□□□□ 0.12
Sdc2P43407 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sdc2P43407 Gm11745-201ENSMUST00000121669 448 ntBASIC15.78■□□□□ 0.12
Sdc2P43407 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.78■□□□□ 0.12
Sdc2P43407 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sdc2P43407 Gm44771-201ENSMUST00000206975 626 ntBASIC15.78■□□□□ 0.12
Sdc2P43407 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.78■□□□□ 0.12
Sdc2P43407 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.78■□□□□ 0.12
Sdc2P43407 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.78■□□□□ 0.12
Sdc2P43407 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sdc2P43407 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sdc2P43407 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.78■□□□□ 0.12
Sdc2P43407 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sdc2P43407 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sdc2P43407 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sdc2P43407 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sdc2P43407 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sdc2P43407 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Sdc2P43407 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sdc2P43407 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sdc2P43407 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sdc2P43407 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Sdc2P43407 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Sdc2P43407 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sdc2P43407 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.77■□□□□ 0.12
Sdc2P43407 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sdc2P43407 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sdc2P43407 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sdc2P43407 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sdc2P43407 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.77■□□□□ 0.12
Sdc2P43407 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sdc2P43407 Rprl2-201ENSMUST00000157150 290 ntBASIC15.77■□□□□ 0.12
Sdc2P43407 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Sdc2P43407 Gm29310-201ENSMUST00000185468 696 ntBASIC15.77■□□□□ 0.12
Sdc2P43407 Gm21825-201ENSMUST00000185728 696 ntBASIC15.77■□□□□ 0.12
Sdc2P43407 Gm29109-201ENSMUST00000185895 696 ntBASIC15.77■□□□□ 0.12
Sdc2P43407 Gm21896-201ENSMUST00000186520 696 ntBASIC15.77■□□□□ 0.12
Sdc2P43407 Gm21873-201ENSMUST00000186728 696 ntBASIC15.77■□□□□ 0.12
Sdc2P43407 Gm21794-201ENSMUST00000187056 696 ntBASIC15.77■□□□□ 0.12
Sdc2P43407 Gm21880-201ENSMUST00000187275 696 ntBASIC15.77■□□□□ 0.12
Sdc2P43407 Gm21826-201ENSMUST00000187451 696 ntBASIC15.77■□□□□ 0.12
Sdc2P43407 Gm21198-201ENSMUST00000188393 696 ntBASIC15.77■□□□□ 0.12
Sdc2P43407 Gm21749-201ENSMUST00000189343 696 ntBASIC15.77■□□□□ 0.12
Sdc2P43407 Gm21901-201ENSMUST00000189568 696 ntBASIC15.77■□□□□ 0.12
Sdc2P43407 Gm29424-201ENSMUST00000189716 696 ntBASIC15.77■□□□□ 0.12
Sdc2P43407 Gm28599-201ENSMUST00000189838 694 ntBASIC15.77■□□□□ 0.12
Sdc2P43407 Gm21867-201ENSMUST00000189917 696 ntBASIC15.77■□□□□ 0.12
Sdc2P43407 Gm29269-201ENSMUST00000190087 696 ntBASIC15.77■□□□□ 0.12
Sdc2P43407 Gm21722-201ENSMUST00000190153 696 ntBASIC15.77■□□□□ 0.12
Sdc2P43407 Gm5264-201ENSMUST00000190584 848 ntBASIC15.77■□□□□ 0.12
Sdc2P43407 Gm28423-201ENSMUST00000190701 696 ntBASIC15.77■□□□□ 0.12
Sdc2P43407 Gm21899-201ENSMUST00000190745 696 ntBASIC15.77■□□□□ 0.12
Sdc2P43407 Gm21910-201ENSMUST00000191163 696 ntBASIC15.77■□□□□ 0.12
Sdc2P43407 Gm21849-201ENSMUST00000191571 696 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms