Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Upk2P38575 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Upk2P38575 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 Gm6415-201ENSMUST00000118488 348 ntBASIC12.36□□□□□ -0.43
Upk2P38575 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Upk2P38575 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.36□□□□□ -0.43
Upk2P38575 Gm24245-201ENSMUST00000157318 57 ntBASIC12.36□□□□□ -0.43
Upk2P38575 Gm26308-201ENSMUST00000157768 69 ntBASIC12.36□□□□□ -0.43
Upk2P38575 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Upk2P38575 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 Gm43575-201ENSMUST00000196420 516 ntBASIC12.36□□□□□ -0.43
Upk2P38575 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Upk2P38575 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.36□□□□□ -0.43
Upk2P38575 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.36□□□□□ -0.43
Upk2P38575 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Upk2P38575 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Upk2P38575 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Upk2P38575 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Upk2P38575 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Upk2P38575 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Upk2P38575 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Upk2P38575 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.35□□□□□ -0.43
Upk2P38575 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.35□□□□□ -0.43
Upk2P38575 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Upk2P38575 Gm28630-201ENSMUST00000187806 498 ntBASIC12.35□□□□□ -0.43
Upk2P38575 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.35□□□□□ -0.43
Upk2P38575 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.35□□□□□ -0.43
Upk2P38575 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.35□□□□□ -0.43
Upk2P38575 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.35□□□□□ -0.43
Upk2P38575 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.35□□□□□ -0.43
Upk2P38575 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.35□□□□□ -0.43
Upk2P38575 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Upk2P38575 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Upk2P38575 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.35□□□□□ -0.43
Upk2P38575 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.35□□□□□ -0.43
Upk2P38575 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.35□□□□□ -0.43
Upk2P38575 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk2P38575 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Upk2P38575 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk2P38575 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk2P38575 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk2P38575 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk2P38575 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk2P38575 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk2P38575 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Upk2P38575 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Upk2P38575 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms