Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.13□□□□□ -0.47
Slc6a1P31648 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Slc6a1P31648 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Slc6a1P31648 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Slc6a1P31648 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Slc6a1P31648 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Slc6a1P31648 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Gm15173-201ENSMUST00000122049 433 ntBASIC12.12□□□□□ -0.47
Slc6a1P31648 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Slc6a1P31648 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.12□□□□□ -0.47
Slc6a1P31648 AW822252-206ENSMUST00000208904 237 ntBASIC12.12□□□□□ -0.47
Slc6a1P31648 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Slc6a1P31648 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Slc6a1P31648 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a1P31648 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Slc6a1P31648 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.11□□□□□ -0.47
Slc6a1P31648 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Slc6a1P31648 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.11□□□□□ -0.47
Slc6a1P31648 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.11□□□□□ -0.47
Slc6a1P31648 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.11□□□□□ -0.47
Slc6a1P31648 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.11□□□□□ -0.47
Slc6a1P31648 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Slc6a1P31648 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Slc6a1P31648 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Slc6a1P31648 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.11□□□□□ -0.47
Slc6a1P31648 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a1P31648 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Slc6a1P31648 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Slc6a1P31648 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
Slc6a1P31648 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms