Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
Cd28P31041 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cd28P31041 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cd28P31041 Gm7230-201ENSMUST00000173026 815 ntBASIC12.42□□□□□ -0.42
Cd28P31041 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.42□□□□□ -0.42
Cd28P31041 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.42□□□□□ -0.42
Cd28P31041 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.42□□□□□ -0.42
Cd28P31041 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Cd28P31041 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cd28P31041 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.42□□□□□ -0.42
Cd28P31041 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Cd28P31041 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Cd28P31041 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.41□□□□□ -0.42
Cd28P31041 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.41□□□□□ -0.42
Cd28P31041 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.41□□□□□ -0.42
Cd28P31041 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.41□□□□□ -0.42
Cd28P31041 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cd28P31041 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Gm37230-201ENSMUST00000194491 818 ntBASIC12.41□□□□□ -0.42
Cd28P31041 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd28P31041 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Cd28P31041 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd28P31041 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.4□□□□□ -0.42
Cd28P31041 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cd28P31041 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cd28P31041 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cd28P31041 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd28P31041 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd28P31041 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cd28P31041 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd28P31041 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd28P31041 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd28P31041 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd28P31041 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Cd28P31041 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd28P31041 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd28P31041 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd28P31041 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd28P31041 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd28P31041 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.4□□□□□ -0.42
Cd28P31041 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd28P31041 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.4□□□□□ -0.42
Cd28P31041 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.4□□□□□ -0.42
Cd28P31041 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd28P31041 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.4□□□□□ -0.42
Cd28P31041 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.4□□□□□ -0.42
Cd28P31041 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms