Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Clk1P22518 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Clk1P22518 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.17□□□□□ -0.3
Clk1P22518 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk1P22518 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Clk1P22518 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk1P22518 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk1P22518 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk1P22518 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Clk1P22518 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Clk1P22518 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
Clk1P22518 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clk1P22518 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk1P22518 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.16□□□□□ -0.3
Clk1P22518 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk1P22518 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Clk1P22518 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clk1P22518 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Clk1P22518 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Clk1P22518 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk1P22518 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk1P22518 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.16□□□□□ -0.3
Clk1P22518 Gm37230-201ENSMUST00000194491 818 ntBASIC13.16□□□□□ -0.3
Clk1P22518 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.16□□□□□ -0.3
Clk1P22518 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk1P22518 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.16□□□□□ -0.3
Clk1P22518 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.16□□□□□ -0.3
Clk1P22518 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Clk1P22518 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clk1P22518 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Clk1P22518 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clk1P22518 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk1P22518 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk1P22518 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Clk1P22518 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.16□□□□□ -0.3
Clk1P22518 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk1P22518 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk1P22518 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk1P22518 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk1P22518 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.15□□□□□ -0.3
Clk1P22518 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clk1P22518 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.15□□□□□ -0.3
Clk1P22518 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Clk1P22518 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.15□□□□□ -0.3
Clk1P22518 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clk1P22518 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.15□□□□□ -0.3
Clk1P22518 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk1P22518 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk1P22518 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk1P22518 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.15□□□□□ -0.3
Clk1P22518 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Clk1P22518 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Clk1P22518 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clk1P22518 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk1P22518 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk1P22518 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.15□□□□□ -0.3
Clk1P22518 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Clk1P22518 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.15□□□□□ -0.3
Clk1P22518 Gm11594-201ENSMUST00000122313 162 ntBASIC13.15□□□□□ -0.3
Clk1P22518 Gm23547-201ENSMUST00000158210 271 ntBASIC13.15□□□□□ -0.3
Clk1P22518 Gm18889-201ENSMUST00000174284 929 ntBASIC13.15□□□□□ -0.3
Clk1P22518 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.15□□□□□ -0.3
Clk1P22518 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Clk1P22518 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk1P22518 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.15□□□□□ -0.3
Clk1P22518 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Clk1P22518 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.15□□□□□ -0.3
Clk1P22518 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk1P22518 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk1P22518 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk1P22518 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Clk1P22518 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk1P22518 Gm10686-201ENSMUST00000215389 3247 ntBASIC13.15□□□□□ -0.3
Clk1P22518 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk1P22518 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.15□□□□□ -0.3
Clk1P22518 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk1P22518 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Clk1P22518 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Clk1P22518 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Clk1P22518 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Clk1P22518 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.15□□□□□ -0.31
Clk1P22518 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clk1P22518 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Clk1P22518 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clk1P22518 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clk1P22518 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clk1P22518 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.14□□□□□ -0.31
Clk1P22518 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms