Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Col1a1P11087 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC16.27■□□□□ 0.19
Col1a1P11087 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC16.27■□□□□ 0.19
Col1a1P11087 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col1a1P11087 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col1a1P11087 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col1a1P11087 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col1a1P11087 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.27■□□□□ 0.19
Col1a1P11087 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Col1a1P11087 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col1a1P11087 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Col1a1P11087 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col1a1P11087 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col1a1P11087 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col1a1P11087 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col1a1P11087 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.26■□□□□ 0.19
Col1a1P11087 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col1a1P11087 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Col1a1P11087 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col1a1P11087 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Col1a1P11087 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col1a1P11087 Gm15544-201ENSMUST00000118776 1531 ntBASIC16.26■□□□□ 0.19
Col1a1P11087 Gm15770-201ENSMUST00000117498 584 ntBASIC16.26■□□□□ 0.19
Col1a1P11087 Gm7029-201ENSMUST00000173226 450 ntBASIC16.26■□□□□ 0.19
Col1a1P11087 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC16.26■□□□□ 0.19
Col1a1P11087 Gm29199-201ENSMUST00000187766 775 ntBASIC16.26■□□□□ 0.19
Col1a1P11087 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC16.26■□□□□ 0.19
Col1a1P11087 Gm7619-201ENSMUST00000210649 1282 ntBASIC16.26■□□□□ 0.19
Col1a1P11087 Gm18935-201ENSMUST00000212692 664 ntBASIC16.26■□□□□ 0.19
Col1a1P11087 Tyms-ps-201ENSMUST00000219550 915 ntBASIC16.26■□□□□ 0.19
Col1a1P11087 AC154462.2-201ENSMUST00000227519 370 ntBASIC16.26■□□□□ 0.19
Col1a1P11087 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col1a1P11087 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Col1a1P11087 Gm10268-201ENSMUST00000085340 555 ntBASIC16.26■□□□□ 0.19
Col1a1P11087 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col1a1P11087 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Col1a1P11087 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Col1a1P11087 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col1a1P11087 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col1a1P11087 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Col1a1P11087 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Col1a1P11087 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col1a1P11087 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col1a1P11087 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col1a1P11087 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
Col1a1P11087 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col1a1P11087 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col1a1P11087 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC16.26■□□□□ 0.19
Col1a1P11087 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col1a1P11087 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col1a1P11087 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col1a1P11087 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col1a1P11087 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.25■□□□□ 0.19
Col1a1P11087 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.25■□□□□ 0.19
Col1a1P11087 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col1a1P11087 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Col1a1P11087 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col1a1P11087 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC16.25■□□□□ 0.19
Col1a1P11087 Gm25927-201ENSMUST00000175058 117 ntBASIC16.25■□□□□ 0.19
Col1a1P11087 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col1a1P11087 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Col1a1P11087 Gm4935-201ENSMUST00000221316 1198 ntBASIC16.25■□□□□ 0.19
Col1a1P11087 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col1a1P11087 Rn7sk-201ENSMUST00000083103 331 ntBASIC16.25■□□□□ 0.19
Col1a1P11087 Gm26315-201ENSMUST00000083890 321 ntBASIC16.25■□□□□ 0.19
Col1a1P11087 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC16.25■□□□□ 0.19
Col1a1P11087 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.25■□□□□ 0.19
Col1a1P11087 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col1a1P11087 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.25■□□□□ 0.19
Col1a1P11087 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col1a1P11087 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col1a1P11087 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col1a1P11087 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col1a1P11087 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col1a1P11087 Gm8706-201ENSMUST00000197372 1491 ntBASIC16.24■□□□□ 0.19
Col1a1P11087 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col1a1P11087 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC16.24■□□□□ 0.19
Col1a1P11087 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Col1a1P11087 Gm16570-201ENSMUST00000161951 436 ntBASIC16.24■□□□□ 0.19
Col1a1P11087 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col1a1P11087 Gm38144-201ENSMUST00000192790 465 ntBASIC16.24■□□□□ 0.19
Col1a1P11087 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC16.24■□□□□ 0.19
Col1a1P11087 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
Col1a1P11087 Gm9368-201ENSMUST00000219348 831 ntBASIC16.24■□□□□ 0.19
Col1a1P11087 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col1a1P11087 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col1a1P11087 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col1a1P11087 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col1a1P11087 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.24■□□□□ 0.19
Col1a1P11087 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col1a1P11087 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col1a1P11087 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.24■□□□□ 0.19
Col1a1P11087 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Col1a1P11087 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.24■□□□□ 0.19
Col1a1P11087 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col1a1P11087 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col1a1P11087 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col1a1P11087 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col1a1P11087 Gm6203-201ENSMUST00000209575 1342 ntBASIC16.24■□□□□ 0.19
Col1a1P11087 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms