Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl1P10146 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Ccl1P10146 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Ccl1P10146 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC10.9□□□□□ -0.66
Ccl1P10146 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC10.9□□□□□ -0.66
Ccl1P10146 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Ccl1P10146 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC10.9□□□□□ -0.66
Ccl1P10146 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Ccl1P10146 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Ccl1P10146 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC10.9□□□□□ -0.66
Ccl1P10146 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC10.9□□□□□ -0.66
Ccl1P10146 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Gm9682-201ENSMUST00000197505 556 ntBASIC10.9□□□□□ -0.66
Ccl1P10146 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC10.9□□□□□ -0.66
Ccl1P10146 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Ccl1P10146 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Ccl1P10146 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl1P10146 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ccl1P10146 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ccl1P10146 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ccl1P10146 AC139054.1-201ENSMUST00000226898 1598 ntBASIC10.9□□□□□ -0.67
Ccl1P10146 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ccl1P10146 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ccl1P10146 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Ccl1P10146 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ccl1P10146 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ccl1P10146 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ccl1P10146 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Gm7935-201ENSMUST00000100555 1278 ntBASIC10.89□□□□□ -0.67
Ccl1P10146 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Ccl1P10146 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC10.89□□□□□ -0.67
Ccl1P10146 Olfr286-202ENSMUST00000205305 969 ntBASIC10.89□□□□□ -0.67
Ccl1P10146 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Ccl1P10146 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC10.89□□□□□ -0.67
Ccl1P10146 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Ccl1P10146 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Ccl1P10146 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Ccl1P10146 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Ccl1P10146 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Ccl1P10146 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl1P10146 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Ccl1P10146 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ccl1P10146 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms