Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Hoxc9P09633 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxc9P09633 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC18.11■□□□□ 0.49
Hoxc9P09633 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxc9P09633 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxc9P09633 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC18.11■□□□□ 0.49
Hoxc9P09633 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxc9P09633 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxc9P09633 Gm8399-201ENSMUST00000082300 1117 ntBASIC18.11■□□□□ 0.49
Hoxc9P09633 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Hoxc9P09633 Gm7553-201ENSMUST00000185805 1426 ntBASIC18.11■□□□□ 0.49
Hoxc9P09633 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxc9P09633 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxc9P09633 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC18.11■□□□□ 0.49
Hoxc9P09633 Dctn4-202ENSMUST00000223590 1530 ntBASIC18.11■□□□□ 0.49
Hoxc9P09633 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxc9P09633 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxc9P09633 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxc9P09633 Gm38102-201ENSMUST00000192791 1935 ntBASIC18.11■□□□□ 0.49
Hoxc9P09633 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxc9P09633 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxc9P09633 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC18.11■□□□□ 0.49
Hoxc9P09633 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxc9P09633 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Hoxc9P09633 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxc9P09633 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxc9P09633 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.1■□□□□ 0.49
Hoxc9P09633 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxc9P09633 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxc9P09633 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxc9P09633 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxc9P09633 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC18.1■□□□□ 0.49
Hoxc9P09633 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC18.1■□□□□ 0.49
Hoxc9P09633 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxc9P09633 Gm5687-201ENSMUST00000118252 640 ntBASIC18.1■□□□□ 0.49
Hoxc9P09633 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxc9P09633 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC18.1■□□□□ 0.49
Hoxc9P09633 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxc9P09633 Gm8584-201ENSMUST00000171982 758 ntBASIC18.1■□□□□ 0.49
Hoxc9P09633 Gm27514-201ENSMUST00000183692 110 ntBASIC18.1■□□□□ 0.49
Hoxc9P09633 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxc9P09633 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxc9P09633 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxc9P09633 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxc9P09633 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxc9P09633 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxc9P09633 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxc9P09633 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Hoxc9P09633 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc9P09633 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc9P09633 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc9P09633 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC18.09■□□□□ 0.49
Hoxc9P09633 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.09■□□□□ 0.49
Hoxc9P09633 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc9P09633 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc9P09633 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC18.09■□□□□ 0.49
Hoxc9P09633 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc9P09633 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc9P09633 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc9P09633 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc9P09633 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc9P09633 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC18.09■□□□□ 0.49
Hoxc9P09633 Gm12384-201ENSMUST00000119228 919 ntBASIC18.09■□□□□ 0.49
Hoxc9P09633 Gm10156-201ENSMUST00000122364 462 ntBASIC18.09■□□□□ 0.49
Hoxc9P09633 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc9P09633 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Hoxc9P09633 Gm8565-201ENSMUST00000183259 1014 ntBASIC18.09■□□□□ 0.49
Hoxc9P09633 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC18.09■□□□□ 0.49
Hoxc9P09633 AC073947.2-201ENSMUST00000215888 1130 ntBASIC18.09■□□□□ 0.49
Hoxc9P09633 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Hoxc9P09633 AC155237.1-201ENSMUST00000226196 1279 ntBASIC18.09■□□□□ 0.49
Hoxc9P09633 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc9P09633 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc9P09633 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc9P09633 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc9P09633 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc9P09633 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Hoxc9P09633 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc9P09633 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc9P09633 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc9P09633 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Hoxc9P09633 Zkscan14-203ENSMUST00000198959 2243 ntBASIC18.08■□□□□ 0.49
Hoxc9P09633 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Hoxc9P09633 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hoxc9P09633 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Hoxc9P09633 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Hoxc9P09633 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hoxc9P09633 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.08■□□□□ 0.49
Hoxc9P09633 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hoxc9P09633 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hoxc9P09633 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hoxc9P09633 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Hoxc9P09633 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Hoxc9P09633 Gm15198-201ENSMUST00000117283 177 ntBASIC18.08■□□□□ 0.48
Hoxc9P09633 Gm5187-201ENSMUST00000117317 991 ntBASIC18.08■□□□□ 0.48
Hoxc9P09633 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC18.08■□□□□ 0.48
Hoxc9P09633 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Hoxc9P09633 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Hoxc9P09633 Gm27331-201ENSMUST00000183705 60 ntBASIC18.08■□□□□ 0.48
Hoxc9P09633 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms