Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.34□□□□□ -0.27
ApoeP08226 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.34□□□□□ -0.27
ApoeP08226 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ApoeP08226 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ApoeP08226 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
ApoeP08226 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ApoeP08226 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
ApoeP08226 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
ApoeP08226 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.33□□□□□ -0.27
ApoeP08226 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ApoeP08226 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.33□□□□□ -0.27
ApoeP08226 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ApoeP08226 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ApoeP08226 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ApoeP08226 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ApoeP08226 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ApoeP08226 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
ApoeP08226 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ApoeP08226 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ApoeP08226 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ApoeP08226 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.33□□□□□ -0.28
ApoeP08226 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
ApoeP08226 Gm34391-201ENSMUST00000203706 907 ntBASIC13.33□□□□□ -0.28
ApoeP08226 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.33□□□□□ -0.28
ApoeP08226 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
ApoeP08226 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ApoeP08226 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ApoeP08226 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ApoeP08226 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ApoeP08226 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.33□□□□□ -0.28
ApoeP08226 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
ApoeP08226 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ApoeP08226 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
ApoeP08226 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ApoeP08226 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ApoeP08226 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ApoeP08226 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ApoeP08226 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ApoeP08226 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ApoeP08226 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ApoeP08226 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ApoeP08226 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ApoeP08226 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ApoeP08226 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
ApoeP08226 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ApoeP08226 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
ApoeP08226 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ApoeP08226 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ApoeP08226 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.32□□□□□ -0.28
ApoeP08226 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ApoeP08226 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ApoeP08226 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
ApoeP08226 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.32□□□□□ -0.28
ApoeP08226 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ApoeP08226 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
ApoeP08226 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ApoeP08226 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ApoeP08226 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.32□□□□□ -0.28
ApoeP08226 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ApoeP08226 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ApoeP08226 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ApoeP08226 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ApoeP08226 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ApoeP08226 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ApoeP08226 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ApoeP08226 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ApoeP08226 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ApoeP08226 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ApoeP08226 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ApoeP08226 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ApoeP08226 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ApoeP08226 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ApoeP08226 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
ApoeP08226 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ApoeP08226 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ApoeP08226 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ApoeP08226 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ApoeP08226 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ApoeP08226 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ApoeP08226 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
ApoeP08226 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ApoeP08226 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ApoeP08226 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ApoeP08226 Gm13036-201ENSMUST00000117799 748 ntBASIC13.31□□□□□ -0.28
ApoeP08226 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.31□□□□□ -0.28
ApoeP08226 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ApoeP08226 Gm7862-201ENSMUST00000121461 292 ntBASIC13.31□□□□□ -0.28
ApoeP08226 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.31□□□□□ -0.28
ApoeP08226 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms