Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PrnpP04925 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PrnpP04925 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.52□□□□□ -0.08
PrnpP04925 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PrnpP04925 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PrnpP04925 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PrnpP04925 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PrnpP04925 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PrnpP04925 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.52□□□□□ -0.08
PrnpP04925 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.52□□□□□ -0.08
PrnpP04925 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PrnpP04925 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PrnpP04925 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PrnpP04925 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PrnpP04925 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PrnpP04925 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PrnpP04925 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.52□□□□□ -0.08
PrnpP04925 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
PrnpP04925 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.52□□□□□ -0.09
PrnpP04925 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PrnpP04925 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PrnpP04925 Gm17420-201ENSMUST00000164753 153 ntBASIC14.52□□□□□ -0.09
PrnpP04925 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.52□□□□□ -0.09
PrnpP04925 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PrnpP04925 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.52□□□□□ -0.09
PrnpP04925 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.52□□□□□ -0.09
PrnpP04925 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PrnpP04925 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PrnpP04925 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PrnpP04925 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PrnpP04925 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PrnpP04925 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PrnpP04925 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.52□□□□□ -0.09
PrnpP04925 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PrnpP04925 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
PrnpP04925 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.52□□□□□ -0.09
PrnpP04925 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PrnpP04925 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PrnpP04925 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PrnpP04925 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PrnpP04925 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PrnpP04925 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.51□□□□□ -0.09
PrnpP04925 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PrnpP04925 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PrnpP04925 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PrnpP04925 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PrnpP04925 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PrnpP04925 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PrnpP04925 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PrnpP04925 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.51□□□□□ -0.09
PrnpP04925 Gm13392-201ENSMUST00000117708 150 ntBASIC14.51□□□□□ -0.09
PrnpP04925 Gm8062-201ENSMUST00000139696 444 ntBASIC14.51□□□□□ -0.09
PrnpP04925 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PrnpP04925 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
PrnpP04925 Gm24196-201ENSMUST00000179161 110 ntBASIC14.51□□□□□ -0.09
PrnpP04925 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
PrnpP04925 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.51□□□□□ -0.09
PrnpP04925 Gm29127-201ENSMUST00000188304 517 ntBASIC14.51□□□□□ -0.09
PrnpP04925 Gm37424-201ENSMUST00000191727 561 ntBASIC14.51□□□□□ -0.09
PrnpP04925 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.51□□□□□ -0.09
PrnpP04925 Gm45331-201ENSMUST00000209868 554 ntBASIC14.51□□□□□ -0.09
PrnpP04925 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
PrnpP04925 Gm10012-201ENSMUST00000078252 192 ntBASIC14.51□□□□□ -0.09
PrnpP04925 Gm10478-201ENSMUST00000084451 396 ntBASIC14.51□□□□□ -0.09
PrnpP04925 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PrnpP04925 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.51□□□□□ -0.09
PrnpP04925 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PrnpP04925 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PrnpP04925 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.51□□□□□ -0.09
PrnpP04925 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PrnpP04925 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PrnpP04925 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PrnpP04925 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PrnpP04925 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PrnpP04925 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PrnpP04925 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PrnpP04925 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PrnpP04925 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PrnpP04925 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PrnpP04925 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.5□□□□□ -0.09
PrnpP04925 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PrnpP04925 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PrnpP04925 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PrnpP04925 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PrnpP04925 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.5□□□□□ -0.09
PrnpP04925 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PrnpP04925 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.5□□□□□ -0.09
PrnpP04925 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PrnpP04925 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PrnpP04925 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PrnpP04925 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
PrnpP04925 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
PrnpP04925 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PrnpP04925 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.5□□□□□ -0.09
PrnpP04925 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PrnpP04925 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PrnpP04925 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.5□□□□□ -0.09
PrnpP04925 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PrnpP04925 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.5□□□□□ -0.09
PrnpP04925 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms