Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TcraP01849 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TcraP01849 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
TcraP01849 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
TcraP01849 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TcraP01849 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
TcraP01849 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
TcraP01849 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
TcraP01849 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
TcraP01849 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TcraP01849 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.29□□□□□ -0.76
TcraP01849 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.29□□□□□ -0.76
TcraP01849 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Gm37411-201ENSMUST00000194180 2282 ntBASIC10.28□□□□□ -0.76
TcraP01849 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
TcraP01849 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC10.28□□□□□ -0.76
TcraP01849 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
TcraP01849 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
TcraP01849 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
TcraP01849 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
TcraP01849 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC10.28□□□□□ -0.76
TcraP01849 Gm7977-201ENSMUST00000193787 748 ntBASIC10.28□□□□□ -0.76
TcraP01849 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.28□□□□□ -0.76
TcraP01849 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
TcraP01849 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
TcraP01849 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
TcraP01849 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
TcraP01849 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC10.27□□□□□ -0.76
TcraP01849 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
TcraP01849 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC10.27□□□□□ -0.76
TcraP01849 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
TcraP01849 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
TcraP01849 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
TcraP01849 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
TcraP01849 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
TcraP01849 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.27□□□□□ -0.76
TcraP01849 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
TcraP01849 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
TcraP01849 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
TcraP01849 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
TcraP01849 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
TcraP01849 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.27□□□□□ -0.77
TcraP01849 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC10.27□□□□□ -0.77
TcraP01849 Gm11453-201ENSMUST00000117318 1007 ntBASIC10.27□□□□□ -0.77
TcraP01849 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC10.27□□□□□ -0.77
TcraP01849 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC10.27□□□□□ -0.77
TcraP01849 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
TcraP01849 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
TcraP01849 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TcraP01849 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TcraP01849 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms