Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf17O88472 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf17O88472 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Tnfrsf17O88472 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf17O88472 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf17O88472 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf17O88472 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf17O88472 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Tnfrsf17O88472 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf17O88472 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.02□□□□□ -0.33
Tnfrsf17O88472 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.02□□□□□ -0.33
Tnfrsf17O88472 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.02□□□□□ -0.33
Tnfrsf17O88472 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.02□□□□□ -0.33
Tnfrsf17O88472 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf17O88472 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf17O88472 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf17O88472 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Tnfrsf17O88472 Snora73a-201ENSMUST00000082453 205 ntBASIC13.02□□□□□ -0.33
Tnfrsf17O88472 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf17O88472 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf17O88472 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf17O88472 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf17O88472 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.02□□□□□ -0.33
Tnfrsf17O88472 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf17O88472 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Tnfrsf17O88472 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf17O88472 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf17O88472 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf17O88472 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf17O88472 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Tnfrsf17O88472 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Gm12485-201ENSMUST00000119641 291 ntBASIC13.01□□□□□ -0.33
Tnfrsf17O88472 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Sybu-209ENSMUST00000228639 4113 ntBASIC13.01□□□□□ -0.33
Tnfrsf17O88472 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13□□□□□ -0.33
Tnfrsf17O88472 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf17O88472 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13□□□□□ -0.33
Tnfrsf17O88472 Gm24255-201ENSMUST00000104481 128 ntBASIC13□□□□□ -0.33
Tnfrsf17O88472 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13□□□□□ -0.33
Tnfrsf17O88472 Gm10156-201ENSMUST00000122364 462 ntBASIC13□□□□□ -0.33
Tnfrsf17O88472 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13□□□□□ -0.33
Tnfrsf17O88472 Gm17376-201ENSMUST00000166016 84 ntBASIC13□□□□□ -0.33
Tnfrsf17O88472 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Gm4271-201ENSMUST00000174444 973 ntBASIC13□□□□□ -0.33
Tnfrsf17O88472 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tnfrsf17O88472 Gm16505-201ENSMUST00000179981 232 ntBASIC13□□□□□ -0.33
Tnfrsf17O88472 Gm29396-201ENSMUST00000185659 716 ntBASIC13□□□□□ -0.33
Tnfrsf17O88472 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13□□□□□ -0.33
Tnfrsf17O88472 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13□□□□□ -0.33
Tnfrsf17O88472 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms