Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Mmp8O70138 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp8O70138 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp8O70138 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp8O70138 Gm15321-201ENSMUST00000121290 288 ntBASIC17.14■□□□□ 0.33
Mmp8O70138 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.14■□□□□ 0.33
Mmp8O70138 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.14■□□□□ 0.33
Mmp8O70138 Gm10576-201ENSMUST00000191927 825 ntBASIC17.14■□□□□ 0.33
Mmp8O70138 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC17.14■□□□□ 0.33
Mmp8O70138 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC17.14■□□□□ 0.33
Mmp8O70138 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Mmp8O70138 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp8O70138 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp8O70138 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC17.14■□□□□ 0.33
Mmp8O70138 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp8O70138 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp8O70138 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.14■□□□□ 0.33
Mmp8O70138 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp8O70138 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp8O70138 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp8O70138 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp8O70138 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp8O70138 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Mmp8O70138 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp8O70138 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp8O70138 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp8O70138 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp8O70138 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC17.13■□□□□ 0.33
Mmp8O70138 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp8O70138 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp8O70138 Gm13385-201ENSMUST00000121089 220 ntBASIC17.13■□□□□ 0.33
Mmp8O70138 Gm21854-201ENSMUST00000179901 471 ntBASIC17.13■□□□□ 0.33
Mmp8O70138 Gm24694-201ENSMUST00000180054 110 ntBASIC17.13■□□□□ 0.33
Mmp8O70138 Gm27663-201ENSMUST00000184839 110 ntBASIC17.13■□□□□ 0.33
Mmp8O70138 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC17.13■□□□□ 0.33
Mmp8O70138 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp8O70138 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp8O70138 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp8O70138 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp8O70138 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp8O70138 Zkscan14-203ENSMUST00000198959 2243 ntBASIC17.13■□□□□ 0.33
Mmp8O70138 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.13■□□□□ 0.33
Mmp8O70138 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp8O70138 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp8O70138 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC17.13■□□□□ 0.33
Mmp8O70138 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Mmp8O70138 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Mmp8O70138 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp8O70138 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Mmp8O70138 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp8O70138 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Mmp8O70138 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp8O70138 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp8O70138 Gm15240-201ENSMUST00000118156 720 ntBASIC17.12■□□□□ 0.33
Mmp8O70138 Gm11557-201ENSMUST00000120200 1008 ntBASIC17.12■□□□□ 0.33
Mmp8O70138 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.12■□□□□ 0.33
Mmp8O70138 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.12■□□□□ 0.33
Mmp8O70138 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.12■□□□□ 0.33
Mmp8O70138 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.12■□□□□ 0.33
Mmp8O70138 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC17.12■□□□□ 0.33
Mmp8O70138 Gm8927-201ENSMUST00000181978 981 ntBASIC17.12■□□□□ 0.33
Mmp8O70138 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC17.12■□□□□ 0.33
Mmp8O70138 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp8O70138 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp8O70138 Gm3222-201ENSMUST00000071282 990 ntBASIC17.12■□□□□ 0.33
Mmp8O70138 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp8O70138 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp8O70138 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp8O70138 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp8O70138 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Mmp8O70138 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp8O70138 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp8O70138 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp8O70138 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp8O70138 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp8O70138 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Mmp8O70138 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp8O70138 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Mmp8O70138 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Mmp8O70138 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp8O70138 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Mmp8O70138 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp8O70138 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp8O70138 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Mmp8O70138 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp8O70138 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp8O70138 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp8O70138 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp8O70138 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp8O70138 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Mmp8O70138 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Mmp8O70138 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Mmp8O70138 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp8O70138 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp8O70138 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Mmp8O70138 Syt7-204ENSMUST00000223586 1344 ntBASIC17.11■□□□□ 0.33
Mmp8O70138 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp8O70138 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Mmp8O70138 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp8O70138 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 114.3 ms