Protein–RNA interactions for Protein: J3QPR6

Rfpl4b, MCG1377, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfpl4bJ3QPR6 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Gm27847-201ENSMUST00000183711 107 ntBASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Gm27375-201ENSMUST00000183799 107 ntBASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Gm27731-201ENSMUST00000185192 107 ntBASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Gm43094-201ENSMUST00000196549 921 ntBASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rfpl4bJ3QPR6 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Gm11524-201ENSMUST00000119349 807 ntBASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Gm6091-201ENSMUST00000098307 165 ntBASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfpl4bJ3QPR6 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Mir1247-201ENSMUST00000116706 82 ntBASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfpl4bJ3QPR6 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rfpl4bJ3QPR6 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Rfpl4bJ3QPR6 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rfpl4bJ3QPR6 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rfpl4bJ3QPR6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rfpl4bJ3QPR6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rfpl4bJ3QPR6 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rfpl4bJ3QPR6 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.08■□□□□ 0.16
Rfpl4bJ3QPR6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfpl4bJ3QPR6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms