Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
B020004C17RikJ3QP07 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
B020004C17RikJ3QP07 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
B020004C17RikJ3QP07 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.61■□□□□ 0.09
B020004C17RikJ3QP07 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
B020004C17RikJ3QP07 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
B020004C17RikJ3QP07 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
B020004C17RikJ3QP07 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
B020004C17RikJ3QP07 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
B020004C17RikJ3QP07 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
B020004C17RikJ3QP07 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
B020004C17RikJ3QP07 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
B020004C17RikJ3QP07 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Gm38002-201ENSMUST00000193255 180 ntBASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
B020004C17RikJ3QP07 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
B020004C17RikJ3QP07 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
B020004C17RikJ3QP07 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
B020004C17RikJ3QP07 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
B020004C17RikJ3QP07 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
B020004C17RikJ3QP07 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.58■□□□□ 0.09
B020004C17RikJ3QP07 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.09
B020004C17RikJ3QP07 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Gm3961-201ENSMUST00000204425 994 ntBASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms