Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Gm8749-201ENSMUST00000117737 331 ntBASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Gm13464-201ENSMUST00000119418 935 ntBASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Gm25911-201ENSMUST00000157621 56 ntBASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Gm45612-201ENSMUST00000211320 160 ntBASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28043E0CXC2 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.12□□□□□ -0.15
Gm28043E0CXC2 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.12□□□□□ -0.15
Gm28043E0CXC2 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms