Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Gm9727-201ENSMUST00000161387 555 ntBASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Mir8117-201ENSMUST00000184773 107 ntBASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-1A0N8R1 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms