Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Gm21871-201ENSMUST00000194621 696 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Pcgf5-211ENSMUST00000225920 6443 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Ccdc112A0AUP1 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ccdc112A0AUP1 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Ccdc112A0AUP1 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ccdc112A0AUP1 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Ccdc112A0AUP1 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ccdc112A0AUP1 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Ccdc112A0AUP1 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Ccdc112A0AUP1 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ccdc112A0AUP1 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc112A0AUP1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ccdc112A0AUP1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ccdc112A0AUP1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.08■□□□□ 0.16
Ccdc112A0AUP1 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.08■□□□□ 0.16
Ccdc112A0AUP1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.08■□□□□ 0.16
Ccdc112A0AUP1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.08■□□□□ 0.16
Ccdc112A0AUP1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc112A0AUP1 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc112A0AUP1 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Ccdc112A0AUP1 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc112A0AUP1 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc112A0AUP1 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc112A0AUP1 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc112A0AUP1 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Ccdc112A0AUP1 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.08■□□□□ 0.16
Ccdc112A0AUP1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc112A0AUP1 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc112A0AUP1 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ccdc112A0AUP1 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc112A0AUP1 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc112A0AUP1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc112A0AUP1 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms