Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.74□□□□□ -0.37
Smim17A0A504 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim17A0A504 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.74□□□□□ -0.37
Smim17A0A504 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim17A0A504 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim17A0A504 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Smim17A0A504 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smim17A0A504 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim17A0A504 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.74□□□□□ -0.37
Smim17A0A504 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim17A0A504 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim17A0A504 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Smim17A0A504 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Smim17A0A504 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim17A0A504 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Smim17A0A504 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim17A0A504 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Smim17A0A504 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim17A0A504 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim17A0A504 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim17A0A504 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Smim17A0A504 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smim17A0A504 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim17A0A504 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim17A0A504 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smim17A0A504 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim17A0A504 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Smim17A0A504 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim17A0A504 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim17A0A504 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim17A0A504 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim17A0A504 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim17A0A504 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim17A0A504 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Smim17A0A504 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim17A0A504 Gm11950-201ENSMUST00000121615 838 ntBASIC12.73□□□□□ -0.37
Smim17A0A504 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smim17A0A504 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.73□□□□□ -0.37
Smim17A0A504 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smim17A0A504 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smim17A0A504 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smim17A0A504 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim17A0A504 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Smim17A0A504 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smim17A0A504 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim17A0A504 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.73□□□□□ -0.37
Smim17A0A504 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim17A0A504 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smim17A0A504 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim17A0A504 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Smim17A0A504 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Smim17A0A504 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Smim17A0A504 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.72□□□□□ -0.37
Smim17A0A504 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.72□□□□□ -0.37
Smim17A0A504 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Smim17A0A504 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Smim17A0A504 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim17A0A504 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smim17A0A504 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Smim17A0A504 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.71□□□□□ -0.37
Smim17A0A504 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smim17A0A504 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.71□□□□□ -0.37
Smim17A0A504 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.71□□□□□ -0.37
Smim17A0A504 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.71□□□□□ -0.37
Smim17A0A504 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smim17A0A504 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smim17A0A504 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smim17A0A504 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smim17A0A504 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Smim17A0A504 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smim17A0A504 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smim17A0A504 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Smim17A0A504 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Smim17A0A504 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Smim17A0A504 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms