Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Gm6912-201ENSMUST00000117218 544 ntBASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Olfr286-202ENSMUST00000205305 969 ntBASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Gm15823-201ENSMUST00000064305 670 ntBASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap99A0A140LIX9 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap99A0A140LIX9 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.83■□□□□ 0.29
Cfap99A0A140LIX9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cfap99A0A140LIX9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.83■□□□□ 0.29
Cfap99A0A140LIX9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Cfap99A0A140LIX9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Cfap99A0A140LIX9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Cfap99A0A140LIX9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cfap99A0A140LIX9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Gm45668-201ENSMUST00000211271 493 ntBASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Gm9908-201ENSMUST00000211534 448 ntBASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Gm9182-201ENSMUST00000217829 639 ntBASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Gm25857-201ENSMUST00000082788 129 ntBASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap99A0A140LIX9 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap99A0A140LIX9 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cfap99A0A140LIX9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms