Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm21009-201ENSMUST00000197169 1669 ntBASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav6n-6A0A075B6B2 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trav6n-6A0A075B6B2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav6n-6A0A075B6B2 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav6n-6A0A075B6B2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav6n-6A0A075B6B2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav6n-6A0A075B6B2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav6n-6A0A075B6B2 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav6n-6A0A075B6B2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav6n-6A0A075B6B2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm4899-201ENSMUST00000178708 719 ntBASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Mir7036b-201ENSMUST00000184791 63 ntBASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm5364-201ENSMUST00000216789 889 ntBASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav6n-6A0A075B6B2 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms