Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ap4s1Q9WVL1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ap4s1Q9WVL1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ap4s1Q9WVL1 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ap4s1Q9WVL1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ap4s1Q9WVL1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ap4s1Q9WVL1 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.52□□□□□ -0.25
Ap4s1Q9WVL1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ap4s1Q9WVL1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ap4s1Q9WVL1 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ap4s1Q9WVL1 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ap4s1Q9WVL1 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ap4s1Q9WVL1 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ap4s1Q9WVL1 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ap4s1Q9WVL1 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ap4s1Q9WVL1 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ap4s1Q9WVL1 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ap4s1Q9WVL1 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ap4s1Q9WVL1 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Gm10252-201ENSMUST00000209541 832 ntBASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ap4s1Q9WVL1 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ap4s1Q9WVL1 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ap4s1Q9WVL1 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ap4s1Q9WVL1 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ap4s1Q9WVL1 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ap4s1Q9WVL1 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Ap4s1Q9WVL1 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.49□□□□□ -0.25
Ap4s1Q9WVL1 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ap4s1Q9WVL1 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ap4s1Q9WVL1 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ap4s1Q9WVL1 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
Ap4s1Q9WVL1 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ap4s1Q9WVL1 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ap4s1Q9WVL1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.49□□□□□ -0.25
Ap4s1Q9WVL1 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ap4s1Q9WVL1 Gm37230-201ENSMUST00000194491 818 ntBASIC13.49□□□□□ -0.25
Ap4s1Q9WVL1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
Ap4s1Q9WVL1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms