Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.87□□□□□ -0.03
Nup50Q9JIH2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 Gm8000-201ENSMUST00000188378 592 ntBASIC14.87□□□□□ -0.03
Nup50Q9JIH2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
Nup50Q9JIH2 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.86□□□□□ -0.03
Nup50Q9JIH2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.85□□□□□ -0.03
Nup50Q9JIH2 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 AA543401-201ENSMUST00000164248 1269 ntBASIC14.85□□□□□ -0.03
Nup50Q9JIH2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.85□□□□□ -0.03
Nup50Q9JIH2 Mir6990-201ENSMUST00000183724 91 ntBASIC14.85□□□□□ -0.03
Nup50Q9JIH2 Gm18766-201ENSMUST00000189811 808 ntBASIC14.85□□□□□ -0.03
Nup50Q9JIH2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.85□□□□□ -0.03
Nup50Q9JIH2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.85□□□□□ -0.03
Nup50Q9JIH2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.85□□□□□ -0.03
Nup50Q9JIH2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup50Q9JIH2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Nup50Q9JIH2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup50Q9JIH2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup50Q9JIH2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nup50Q9JIH2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup50Q9JIH2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup50Q9JIH2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nup50Q9JIH2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Nup50Q9JIH2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.84□□□□□ -0.03
Nup50Q9JIH2 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.84□□□□□ -0.03
Nup50Q9JIH2 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup50Q9JIH2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms