Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tubb3Q9ERD7 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tubb3Q9ERD7 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tubb3Q9ERD7 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tubb3Q9ERD7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tubb3Q9ERD7 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Tubb3Q9ERD7 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.03□□□□□ -0.16
Tubb3Q9ERD7 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tubb3Q9ERD7 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tubb3Q9ERD7 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tubb3Q9ERD7 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tubb3Q9ERD7 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tubb3Q9ERD7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Tubb3Q9ERD7 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Tubb3Q9ERD7 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tubb3Q9ERD7 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.03□□□□□ -0.16
Tubb3Q9ERD7 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tubb3Q9ERD7 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tubb3Q9ERD7 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tubb3Q9ERD7 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tubb3Q9ERD7 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tubb3Q9ERD7 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tubb3Q9ERD7 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tubb3Q9ERD7 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tubb3Q9ERD7 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tubb3Q9ERD7 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tubb3Q9ERD7 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tubb3Q9ERD7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tubb3Q9ERD7 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Tubb3Q9ERD7 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tubb3Q9ERD7 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
Tubb3Q9ERD7 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tubb3Q9ERD7 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Tubb3Q9ERD7 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tubb3Q9ERD7 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tubb3Q9ERD7 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.02□□□□□ -0.16
Tubb3Q9ERD7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tubb3Q9ERD7 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tubb3Q9ERD7 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.02□□□□□ -0.17
Tubb3Q9ERD7 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tubb3Q9ERD7 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tubb3Q9ERD7 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tubb3Q9ERD7 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tubb3Q9ERD7 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tubb3Q9ERD7 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tubb3Q9ERD7 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Tubb3Q9ERD7 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tubb3Q9ERD7 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tubb3Q9ERD7 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tubb3Q9ERD7 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.02□□□□□ -0.17
Tubb3Q9ERD7 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Tubb3Q9ERD7 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tubb3Q9ERD7 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tubb3Q9ERD7 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tubb3Q9ERD7 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tubb3Q9ERD7 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tubb3Q9ERD7 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Tubb3Q9ERD7 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tubb3Q9ERD7 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tubb3Q9ERD7 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Tubb3Q9ERD7 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tubb3Q9ERD7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Gm8584-201ENSMUST00000171982 758 ntBASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tubb3Q9ERD7 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms