Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Chmp4bQ9D8B3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp4bQ9D8B3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp4bQ9D8B3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp4bQ9D8B3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp4bQ9D8B3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp4bQ9D8B3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp4bQ9D8B3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp4bQ9D8B3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp4bQ9D8B3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp4bQ9D8B3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Chmp4bQ9D8B3 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Chmp4bQ9D8B3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp4bQ9D8B3 Gm15693-201ENSMUST00000120470 637 ntBASIC17.77■□□□□ 0.44
Chmp4bQ9D8B3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC17.77■□□□□ 0.44
Chmp4bQ9D8B3 Gm7774-201ENSMUST00000200064 533 ntBASIC17.77■□□□□ 0.44
Chmp4bQ9D8B3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp4bQ9D8B3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp4bQ9D8B3 Gm8396-201ENSMUST00000057361 823 ntBASIC17.77■□□□□ 0.44
Chmp4bQ9D8B3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp4bQ9D8B3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Chmp4bQ9D8B3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp4bQ9D8B3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp4bQ9D8B3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp4bQ9D8B3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp4bQ9D8B3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp4bQ9D8B3 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp4bQ9D8B3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp4bQ9D8B3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp4bQ9D8B3 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC17.77■□□□□ 0.43
Chmp4bQ9D8B3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp4bQ9D8B3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp4bQ9D8B3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp4bQ9D8B3 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Chmp4bQ9D8B3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp4bQ9D8B3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp4bQ9D8B3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp4bQ9D8B3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Chmp4bQ9D8B3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.76■□□□□ 0.43
Chmp4bQ9D8B3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.76■□□□□ 0.43
Chmp4bQ9D8B3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp4bQ9D8B3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.76■□□□□ 0.43
Chmp4bQ9D8B3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp4bQ9D8B3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp4bQ9D8B3 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp4bQ9D8B3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp4bQ9D8B3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Chmp4bQ9D8B3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp4bQ9D8B3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp4bQ9D8B3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp4bQ9D8B3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Chmp4bQ9D8B3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Mir449b-201ENSMUST00000104833 80 ntBASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Gm9347-201ENSMUST00000211473 1607 ntBASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Chmp4bQ9D8B3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp4bQ9D8B3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp4bQ9D8B3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp4bQ9D8B3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp4bQ9D8B3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp4bQ9D8B3 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp4bQ9D8B3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Chmp4bQ9D8B3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp4bQ9D8B3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp4bQ9D8B3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp4bQ9D8B3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp4bQ9D8B3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms