Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Gm3436-201ENSMUST00000179930 840 ntBASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Gm9229-201ENSMUST00000222777 126 ntBASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps28Q9D1C8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Vps28Q9D1C8 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps28Q9D1C8 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps28Q9D1C8 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Mir6977-201ENSMUST00000184960 64 ntBASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps28Q9D1C8 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Gm15957-201ENSMUST00000118893 974 ntBASIC14.44□□□□□ -0.1
Vps28Q9D1C8 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Gm15487-201ENSMUST00000122373 465 ntBASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Gm6916-202ENSMUST00000205523 195 ntBASIC14.44□□□□□ -0.1
Vps28Q9D1C8 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vps28Q9D1C8 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps28Q9D1C8 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps28Q9D1C8 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps28Q9D1C8 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps28Q9D1C8 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps28Q9D1C8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps28Q9D1C8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps28Q9D1C8 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vps28Q9D1C8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms