Protein–RNA interactions for Protein: Q9D0P8

Ift27, Intraflagellar transport protein 27 homolog, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift27Q9D0P8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Gm18246-201ENSMUST00000221023 728 ntBASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift27Q9D0P8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Gm4535-201ENSMUST00000182274 558 ntBASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Gm10355-201ENSMUST00000097146 517 ntBASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ift27Q9D0P8 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift27Q9D0P8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms