Protein–RNA interactions for Protein: Q9CZB3

Thumpd2, THUMP domain-containing protein 2, mousemouse

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd2Q9CZB3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd2Q9CZB3 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd2Q9CZB3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd2Q9CZB3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Thumpd2Q9CZB3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd2Q9CZB3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd2Q9CZB3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd2Q9CZB3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd2Q9CZB3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd2Q9CZB3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd2Q9CZB3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Thumpd2Q9CZB3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Thumpd2Q9CZB3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd2Q9CZB3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Gm18737-201ENSMUST00000173594 937 ntBASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Gm44608-201ENSMUST00000206827 855 ntBASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Gm18057-201ENSMUST00000208220 503 ntBASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd2Q9CZB3 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Thumpd2Q9CZB3 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Thumpd2Q9CZB3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Thumpd2Q9CZB3 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.77□□□□□ -0.04
Thumpd2Q9CZB3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Thumpd2Q9CZB3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Thumpd2Q9CZB3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.77□□□□□ -0.04
Thumpd2Q9CZB3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Thumpd2Q9CZB3 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.77□□□□□ -0.04
Thumpd2Q9CZB3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Thumpd2Q9CZB3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Thumpd2Q9CZB3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Thumpd2Q9CZB3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Thumpd2Q9CZB3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Thumpd2Q9CZB3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd2Q9CZB3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd2Q9CZB3 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd2Q9CZB3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd2Q9CZB3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd2Q9CZB3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd2Q9CZB3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Thumpd2Q9CZB3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd2Q9CZB3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd2Q9CZB3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd2Q9CZB3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.76□□□□□ -0.05
Thumpd2Q9CZB3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd2Q9CZB3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd2Q9CZB3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms